Methanocaldococcus bathoardescens: JH146_0006
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Entry
JH146_0006 CDS
T03253
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
mjh
Methanocaldococcus bathoardescens
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjh03000
]
JH146_0006
Transcription factors [BR:
mjh03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
JH146_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_5
HTH_20
MarR_2
NirdL-like_HTH
MarR
HTH_11
Sigma70_r4
HTH_IclR
Sigma70_r4_2
HTH_50
HTH_28
Fe_dep_repress
TrmB
HTH_23
HTH_38
HVO_A0114
DUF2089
MtrG
AsnC_trans_reg_3
HTH_34
HTH_DeoR
HTH_27
Mga
GerE
HTH_36
DUF7343
PCI
HTH_Tnp_ISL3
HTH_10
TFIIB
Calici_PP_N
DIP2311-like_C
HTH_31
HTH_29
PaaX
Motif
Other DBs
NCBI-ProteinID:
AIJ04857
UniProt:
A0A076LDH5
LinkDB
All DBs
Position
complement(7556..8002)
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AA seq
148 aa
AA seq
DB search
MIDRIDLKILRILNENARKSFREIGRELGISEGTVRNRVKKMIENGIITGFHASINPKNL
GFEVVAILGLYIKPSKVEETLNKLKELDEIVELYQTTGEYDAVCIAILKDMESLGNFLAE
KIYPLVNVNGCKVTLVLRTFKDGSKMPI
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgattgacaggattgatttaaaaatcctaagaattttaaatgaaaatgccagaaaatca
tttagagagattgggagggaattggggattagtgaggggactgtaagaaatagagtaaaa
aaaatgattgaaaatggtattataacaggttttcatgcatccataaatccaaaaaattta
gggtttgaagttgtggctattttaggtttatatataaagccatctaaggttgaagaaacg
ctcaataaattaaaagagcttgatgaaattgtagagctttatcaaacaactggagaatat
gatgctgtctgtatagcaattttaaaggatatggaaagtttagggaactttttggcagag
aagatatatccattagttaatgttaacggatgtaaggtaactctcgtattaaggactttt
aaagatggtagtaagatgccaatataa
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