Methanocaldococcus bathoardescens: JH146_0009
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Entry
JH146_0009 CDS
T03253
Name
(GenBank) H/ACA RNA-protein complex component Cbf5p
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mjh
Methanocaldococcus bathoardescens
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mjh03016
]
JH146_0009
Enzymes [BR:
mjh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JH146_0009
Transfer RNA biogenesis [BR:
mjh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JH146_0009
Prokaryotic type
JH146_0009
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
UPF0113
Pus10_C
GIDA
Motif
Other DBs
NCBI-ProteinID:
AIJ04860
UniProt:
A0A076L963
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All DBs
Position
8769..9773
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AA seq
334 aa
AA seq
DB search
MEKTQEKKINNIEGELIVREDAETNWNYGCDPYKRKIDDLIKYGVVVVDKPRGPTSHEVS
TWVKKILNLDKAGHGGTLDPKVTGVLPVALEKATKTIPMWHIPPKEYICLMHLHRDASEE
DILRVFKEFTGRIYQRPPLKAAVKRRLRIRRIHELELLDKDGKDVLFRVKCQSGTYIRKL
CEDIGEALGTSAHMQELRRVKSGCFEEKDAVCLQDLVDAYHFWKEDGDEEELRRVIKPME
YGLRHLKKVVVKDSAVDAICHGADVYVRGIAKLSKGIGKGETVLVETLKGEAIGVGKALM
NTKEILNADKGIAVDVERVYMDRGTYPRMWKRRK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaactcaggaaaaaaagataaataatatagaaggagagcttatagttagagaa
gatgctgaaacaaactggaattacggatgtgacccatataaaagaaaaatagatgattta
ataaaatatggtgttgttgtagttgataaaccaagaggtccaacatctcatgaggtttca
acatgggtaaagaaaatcttaaacttagataaagctggacatggtgggacattagaccca
aaggttactggtgttttgcctgttgcgttagagaaggctacaaaaacaataccaatgtgg
catattccgcctaaagaatatatctgcctaatgcatctacatagggatgcttccgaagaa
gatatattgagagtctttaaagaatttacaggaaggatttatcaaagaccaccattaaaa
gcggctgttaaaagaagattgaggattaggaggattcatgagttagaattattagataaa
gatggtaaggatgttttatttagggttaaatgccaatctgggacttatataaggaaatta
tgtgaagatataggggaagcgttaggaacatctgcccacatgcaagagctaagaagagtt
aaaagtggatgctttgaagagaaagatgctgtttgtctgcaagatttagttgatgcatat
catttttggaaagaagatggagatgaagaggagttaaggagagtaataaaaccaatggaa
tatggattgagacatttaaagaaagttgttgttaaggattctgctgttgatgctatttgc
catggagcagatgtttatgttagggggatagctaaattgagtaaaggtattggaaaggga
gaaacagttttagttgagacgttgaaaggagaagcaattggagtaggaaaggcattaatg
aacacaaaagagattttaaatgcagataaaggcattgctgttgatgttgaaagagtttat
atggataggggaacgtatccaaggatgtggaaaagaaggaagtga
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