Methanocaldococcus bathoardescens: JH146_0307
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Entry
JH146_0307 CDS
T03253
Name
(GenBank) SMC domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mjh
Methanocaldococcus bathoardescens
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjh03400
]
JH146_0307
DNA repair and recombination proteins [BR:
mjh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JH146_0307
Archaeal homologous recombinant proteins
JH146_0307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
AAA_15
AAA_29
AAA_13
SbcC_Walker_B
ATG17_like
AAA_21
Occludin_ELL
NPV_P10
ABC_tran
FUSC-like
Fez1
Motif
Other DBs
NCBI-ProteinID:
AIJ05158
UniProt:
A0A076LFC8
LinkDB
All DBs
Position
283586..286609
Genome browser
AA seq
1007 aa
AA seq
DB search
MILNSIKMNNFKSHVNTKINFNDGIVAIIGENGSGKSSIFEAVFFALFGADALKKMGLTY
DAIITKGKKAMSVELEFEVNGNKYKVIREYDGRSSAKLYKNSELYVKTVNEVNKAISEIL
GVDKDMFLNSIYIKQGEIANLLNLSPSERKEVIGKLLGIEEFEKCYQKMREVISEYEKQL
REIEGNLNQKKSYEKELNDKENELSKKEKELELIKNKINKIKEEFEIAKKNFEEWKNKKS
LYEKLINKLEERNKALELANNELENLKYDLNEVIKAKDILKVYKDEYEEYKSLIDEIRVI
DKRLKDLQPAYEGYLKLSKKLEAIGEDIKNLKEFISKSKYKDKIDELDKILENIKGNIEE
IENIKELLGELENLYEKLDEIEKYKKVANEYKEYYEKYLELEKKIDEYSKLNLEYTKLLQ
NKKSVEDNIRNLTYEIEKIENELNNINIEEIKKLLDEIEKKKDELTQLQKQKEELKQRIG
EINNEIKRIEKVLEELKDVEGKCPLCKTPIDEDKKHDLINSHKTQLNNKYNELEKIKRKI
KEIENEINEINNEIAKEKKLRELETKYHEKQKNLESLKLKLDEFKKELDNVENQISNYII
NGKLINELLEEAKSQLNEIKDKYNEYMSAMKYLNSVDEEKLKENIRDIKERIKGWNKEKC
KEELKKLREEEKEVSYLKDKIVELKKKENEFKELENKMLSKLGMYKEYLSLNEKLERYKK
RQYELEDIYKRCNSAEITLNNIKRKYGKEDIENYLNNKILEVNEKIKDIEERINYINQKL
NEINYSDEKYVEIEKEFEKKQNELKDAEIEMSKIESQIKYLKDDIENINLKLKELSELEK
EREKLIKFIEYLNKIRKIFSRDGFQGFLRERYVPLIQKYLNEAFNEFDLPYSFVELTKDF
EIKVHSPNGILTIDNLSGGEQIAVALSLRLAIANALIGNRVECIILDEPTVYLDENRRAK
LAEIFRKINSVPQMIIITHHRELEDVADTIINVTKEGGISKVKVNES
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgatactaaatagcataaagatgaacaactttaaaagccatgttaatacaaaaatcaac
tttaatgatggaattgtcgccattattggagaaaatggtagtggaaagtcatcaatattt
gaggcagtgttttttgccttatttggggctgatgctttgaaaaagatgggtttaacttac
gatgcaattataaccaaaggtaaaaaggctatgtctgttgagcttgaatttgaagtgaat
ggcaataaatataaggttattagggaatatgatgggagaagttcagcaaaactatataaa
aacagtgaattgtatgtaaaaacagttaatgaagttaataaagcaatttctgaaatttta
ggagtagataaagatatgtttttaaattccatatatattaagcagggagagatagcaaat
cttttaaatttgtcaccatctgaaagaaaagaagttattggaaagcttttaggaatagaa
gaatttgaaaagtgctatcaaaaaatgagagaggttattagtgagtatgaaaaacagtta
agagaaattgaaggaaatttaaatcagaaaaaaagttatgagaaagaactaaatgataaa
gaaaatgaattatctaaaaaagaaaaagaacttgaactaattaaaaataagataaataaa
attaaggaagaatttgaaatcgctaaaaagaattttgaagaatggaaaaacaaaaaatct
ttatatgaaaaattgataaataaacttgaagagagaaataaagctttagaacttgccaat
aacgaacttgaaaacttaaaatatgatttaaatgaagttataaaagcaaaagacatatta
aaagtatataaagatgaatatgaagaatataaatctctaattgatgaaattagagtaatt
gataaaagattaaaagatttacagccagcttatgaaggatacttaaagttgtctaagaaa
ttagaggctattggggaagatatcaaaaatttaaaagaatttatcagtaaaagtaagtat
aaagacaaaattgatgaattagataagattttagagaatattaaaggaaatattgaagaa
attgaaaatattaaagaattgcttggtgaactcgaaaatctatatgaaaagcttgatgag
attgagaaatataagaaagttgctaatgaatataaagaatactatgagaaatacttagaa
ttagagaagaaaatagatgaatatagcaaattaaatttagagtacaccaaattattgcaa
aataaaaaatcagttgaagataatataagaaatctaacttatgaaattgaaaaaattgaa
aatgaattaaataatataaatattgaagaaatcaaaaaattattggatgagattgaaaaa
aagaaagatgaacttactcaattacaaaaacaaaaagaagagttgaaacaaagaattggt
gaaatcaataatgaaattaaaaggatagaaaaggttttagaagagcttaaagacgttgaa
ggaaaatgtccattatgtaaaacaccaatagacgaggataaaaagcacgatttaataaat
tctcataaaactcaattaaataacaaatacaatgaattggaaaagataaaaagaaaaata
aaagaaattgagaatgaaataaatgaaataaataatgaaattgctaaagagaagaagctt
agggagcttgaaactaaatatcatgaaaaacagaagaatttagaaagtttaaagttaaaa
ttagatgagtttaagaaagaattagacaatgttgagaatcaaataagcaactatattatc
aatggaaaattaataaatgaattgttagaggaagctaaatcccaactaaatgaaattaaa
gataaatacaatgaatacatgtctgcaatgaagtatttaaatagtgttgatgaagaaaag
cttaaagaaaatattagagatattaaagagagaattaaaggatggaataaagagaagtgt
aaagaagagctaaaaaaacttagagaagaagagaaagaagtgtcttatttaaaagataaa
attgtagagcttaaaaagaaagaaaatgaattcaaagaacttgaaaataaaatgttatca
aagttaggaatgtataaagaatatttatcattaaatgaaaaattagagagatataaaaag
agacagtatgagctcgaagatatatataagagatgcaattcagcagaaattactttaaac
aacatcaaaagaaaatatggaaaagaagatattgaaaattacttaaataataaaatttta
gaagttaatgaaaaaattaaagacatagaagagagaattaattatataaatcaaaagctc
aatgagataaattattctgatgaaaaatatgtcgagatagagaaagagtttgagaaaaag
cagaatgaacttaaagatgctgaaatagagatgagcaaaatagaatcacaaataaaatat
ttaaaagatgatattgaaaacataaatctaaaattaaaagaactatctgagttggaaaaa
gaaagagagaaattaataaagtttattgagtatttaaataagattagaaaaatatttagt
agagatggattccaagggtttctaagagaaagatatgttccattaatccagaaatattta
aatgaggcatttaatgagtttgacttgccttacagctttgtagagcttactaaagatttt
gagataaaggttcattcccctaatggcatcttaactatagataatttaagtggtggggaa
caaatagctgttgctctctctttaagattggctatagccaatgctttaattgggaatagg
gttgagtgcattatcttagatgaaccaacagtatatttagatgaaaacagaagagctaag
ttggctgaaatatttagaaaaattaatagcgttccacagatgataattataactcaccat
agagaacttgaagatgtcgcagatactataatcaatgttacaaaagaaggtggaatttca
aaggttaaagttaatgaatcctaa
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