Methanocaldococcus bathoardescens: JH146_0546
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Entry
JH146_0546 CDS
T03253
Name
(GenBank) Transposase, IS605 OrfB
KO
K07496
putative transposase
Organism
mjh
Methanocaldococcus bathoardescens
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
JH146_0546
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
COG2_C
Hikeshi-like_C
Nod1
Motif
Other DBs
NCBI-ProteinID:
AIJ05395
UniProt:
A0A076LAI9
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Position
549287..550768
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AA seq
493 aa
AA seq
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MKVIGRIYIYDNRLKNIAPFTIQLAHFRNMLIILILKLKEHLSYYPTNEALLYSLLADRL
NKRTLNNLEKLQKLNEISNIIKSDNFLSKLLNSMKKLKKELNNNYAIQSIIRQVCRDFKA
YRKAYEEYLANSNKFSGKPKPPKAKKLKNIDKFTVELNKMSFKINNKILHVKLHKNKQIR
IKLPEFIKEPSSVRITYYLGFAYVDIVYDKHIEELKPLGKYKAGIDLGVENFATVVSTND
NVPSIVVKSSYLKSFNQWWNKLSAKLRSQIDTIKNLLKENPDDKNILLELKILTKRIKKL
HLHRKKWMENIVHQVSKAISVFLHQTEHDKVFIGRNILEAKNGSNLSKRVNQNFVQIPFR
LFIDKLAYKLKWLGIKLVEVDESYTSKASCISDDIIEIQRRVGNNEKVSMSGDRICRGLY
FDKIVNLIFHADVNGAFNILKVGLKKKRLFKKVDKIVKVKLCRPKAVRLFEFCRAVLGNL
CPPNWAVEVGLSR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaattggcagaatctacatctatgacaatcgattaaaaaacatagcacccttc
acaatccaattagcacacttccgaaatatgctaataatcctaatcctcaagttaaaagaa
catttaagttattatccaactaatgaagcgttattgtactctctattagctgatagatta
aataaaagaacgttaaataatttagaaaaactacaaaaacttaacgaaatctcaaacata
ataaaatccgataattttttatccaaattattaaacagcatgaaaaagttaaaaaaggaa
ctaaataacaattatgccatacaatcgattataagacaagtttgtagggattttaaggca
tatagaaaagcttatgaagaatatttagcaaactcaaacaaattcagtggaaaaccgaaa
ccaccaaaagctaaaaagctaaaaaatatcgataaattcactgtagagctaaataaaatg
agttttaagataaataataaaatcttacatgttaaactgcataaaaataaacaaattcga
ataaaactgccagaatttataaaagagccaagcagtgttcgaattacttattatttgggc
tttgcttatgtggatattgtttatgataagcacattgaagagttgaaaccgttaggaaag
tataaggctggaatcgatttaggggtagagaacttcgccactgttgtatctacaaacgat
aacgttccatcaatcgttgtgaaatcctcttatcttaaatcgttcaaccaatggtggaac
aaactatctgccaagctcagaagccaaatcgatactattaaaaacctactaaaagaaaat
ccagatgataagaatatattattggaattgaagattttgactaagaggattaaaaaactg
catctgcatcggaagaagtggatggagaatatagttcaccaagtatctaaagctatatca
gtatttttacatcaaactgaacacgataaggtttttatcggtaggaatattttagaggct
aagaatggtagtaatttaagtaaaagagtcaatcaaaactttgttcaaataccgtttagg
ttgtttatcgataagttggcttataagcttaaatggcttggaattaaattggtagaagtg
gatgagagttatacttctaaggcttcttgtatttcggatgatattatcgaaattcaaagg
agggttgggaataatgagaaagtctctatgtcgggagacagaatatgtagaggtttatat
tttgataaaatcgttaatttgatattccacgccgatgttaatggtgcttttaacattcta
aaagtcggtttaaagaagaaaaggctatttaagaaagtcgataaaatagttaaggttaag
ctctgcagacctaaagctgtaagattattcgaattctgtagggctgtgttaggcaacctc
tgccccccaaattgggcggtagaggttggtctatcccgttaa
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