KEGG   Methanocaldococcus bathoardescens: JH146_0567
Entry
JH146_0567        CDS       T03253                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mjh  Methanocaldococcus bathoardescens
Pathway
mjh03030  DNA replication
mjh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mjh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JH146_0567
   03410 Base excision repair
    JH146_0567
   03450 Non-homologous end-joining
    JH146_0567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mjh03032]
    JH146_0567
   03400 DNA repair and recombination proteins [BR:mjh03400]
    JH146_0567
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mjh04147]
    JH146_0567
DNA replication proteins [BR:mjh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    JH146_0567
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     JH146_0567
DNA repair and recombination proteins [BR:mjh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     JH146_0567
Exosome [BR:mjh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   JH146_0567
SSDB
Motif
Pfam: XPG_I XPG_N UVR COG4_N HSCB_C DUF1002
Other DBs
NCBI-ProteinID: AIJ05416
UniProt: A0A076LB48
LinkDB
Position
569517..570497
AA seq 326 aa
MGVQFGDFIPKKIISFEDLKGKKIAIDGMNALYQFLTSIRLKDGSPLRNRKGEITSAYNG
VFYKTIHLLENDITPIWVFDGEPPKLKEKTRKVRREMKEKAEIKMKEAIKKEDFEEAAKY
AKRVSYLTPKIVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDYDSLLYG
SPRVVRNLTTTKEMPELIELNEVLEDLKISLDDLIDIAIFMGTDYNPGGVKGIGFKRAYE
LVRSGVAKDVLKKEVENYEEIRRIFKQPKVTDDYSLSLKLPNKEGIIKFLVDENDFNYER
VKKHVDKLYNLIANKTKQKTLDAWFK
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggagtgcagtttggtgactttataccaaaaaaaattatttcttttgaagatttaaaa
gggaaaaagattgctattgatggaatgaacgcattatatcaatttttaacttctataaga
ttgaaggatggttcaccattaagaaataggaagggagagataacttctgcatataacgga
gttttttataaaactatccatttgttagaaaatgatataacaccaatctgggtttttgat
ggtgagccacctaagttaaaggagaaaacaagaaaagttaggagggagatgaaagaaaag
gcagaaattaagatgaaagaggcaattaaaaaagaagattttgaagaagcggctaaatat
gcaaagagagttagctacttaacaccaaaaattgttgaaaattgcaaatatctattaagt
ttaatgggaattccttatgttgaagccccttctgagggagaggctcaagcaagctatatg
gcaaagaaaggtgatgtttgggcagttgtaagtcaagattatgattctttattatatggc
tcaccaagagttgttagaaatttaacaacaacaaaagagatgccagaacttattgaatta
aatgaggttttagaagatttgaaaatctctttagatgatttgattgatatagccatattc
atgggaactgactacaatccaggaggggttaaaggtattggatttaagagagcctatgaa
ttagttagaagtggagttgctaaagatgttttgaaaaaagaagttgaaaactatgaagaa
ataagaagaatatttaaacagccaaaggttactgacgactactcattaagtttaaaatta
ccaaataaagaaggaatcattaaatttttagttgatgaaaatgattttaactatgagaga
gttaaaaagcatgttgataaactctataatttaattgcaaataaaacaaagcagaaaaca
ttagatgcatggtttaaataa

DBGET integrated database retrieval system