Methanocaldococcus bathoardescens: JH146_0687
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Entry
JH146_0687 CDS
T03253
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
mjh
Methanocaldococcus bathoardescens
Pathway
mjh03030
DNA replication
mjh03420
Nucleotide excision repair
mjh03430
Mismatch repair
mjh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JH146_0687
03420 Nucleotide excision repair
JH146_0687
03430 Mismatch repair
JH146_0687
03440 Homologous recombination
JH146_0687
03460 Fanconi anemia pathway
JH146_0687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjh03000
]
JH146_0687
03032 DNA replication proteins [BR:
mjh03032
]
JH146_0687
03400 DNA repair and recombination proteins [BR:
mjh03400
]
JH146_0687
Transcription factors [BR:
mjh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
JH146_0687
DNA replication proteins [BR:
mjh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
JH146_0687
DNA repair and recombination proteins [BR:
mjh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
JH146_0687
MMR (mismatch excision repair)
JH146_0687
DSBR (double strand breaks repair)
HR (homologous recombination)
JH146_0687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Rep_fac-A_C
SHLD2_OB1
DUF3127
DUF2240
DUF4131
DUF7565
OB_MEIOB_N
Motif
Other DBs
NCBI-ProteinID:
AIJ05536
UniProt:
A0A076LBK8
LinkDB
All DBs
Position
complement(691112..693067)
Genome browser
AA seq
651 aa
AA seq
DB search
MIGDYERFKKLKKKVAEALNISEEELDEMIKEKIKEFGGILLKDAALMMIAKEHGIDIDK
KEEEEFLIKDIEEGQINVEITGVVTDVSDVKTFTRKDGTEGRYRKITIADKSGTIGMTLW
DDLAEIDIKVGEVLKIKRARARKWGDRLELSSTSETKIEKLENYEGELPEIKDIYDIGEL
SPGMTATFEGEVISALPIKEFKKADGSLGRLKSFIVKDETGSIRVTLWDELTDIDVGRGD
YVRVRGYVRNGYYGGLECTASNVEILKKGEKIESEEINVDDLPKYEDGELVTVKGRVIAI
SSKRSVDLDGEIAKVQDVLLDNGTGRVRVSFWRGKTALLENIKEGDLVRITNCRVKTYYD
REGNKRADLVATADTEVVKDESIEAPEYELKYCKIEDIYNRDVDWNDINLIAQVVEDYGI
NEIEFENGIRKVRNLILEDGTGRIRLSLWDDLAEIEIREGDIIEILHAYAKERGDYIDLV
LGKYGRIIINPEGVEIKSNRKFIADIEDGETVEVRGAVVKILSDNLFLYLCPNCKKRVVE
IDGIYNCPICGDVEPEEILRLNFVVDDGTGTLLCRAYDRRVEKMLKMRREELKNLSIEMV
EDEILGEEFVLYGNVRVENDELIIVVRRIGYVDVEKEIKILEEMEYSQSSN
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgataggagattatgagagatttaaaaaacttaaaaaaaaggttgccgaagcattgaac
attagtgaagaagaattggatgaaatgattaaagaaaaaattaaagaatttggagggata
ttgttaaaagatgccgctttaatgatgattgcaaaagaacatggtattgatattgacaaa
aaagaagaggaagagtttttaattaaagatattgaagaggggcagataaatgttgaaata
actggggttgttacagatgtttctgatgtaaaaacatttacaaggaaagatggaactgag
ggaagatataggaagataactatcgctgacaaatctggaacaattggtatgactttgtgg
gatgatttagctgagatagatattaaagttggagaggtattaaaaataaaaagagcaagg
gcaagaaagtggggagatagattagagcttagctcaacatccgaaacaaagattgaaaaa
ttagagaactatgaaggagaacttccagagattaaagatatatatgatattggtgagcta
agcccagggatgacagcaacatttgaaggagaagttatttcagctttaccaataaaagaa
tttaaaaaggcagatggtagtttaggaagattaaaatcatttattgttaaagatgaaaca
ggaagtataagagttaccttatgggatgagctaacagatattgatgttggtagaggagat
tatgttagagttagaggatatgtaagaaatggctactatggagggttggaatgcacagca
agtaatgtagagatattgaaaaaaggagagaaaatagagagtgaggaaataaatgttgat
gatttaccaaaatatgaagatggagaattggttacagttaaaggtagagttatagctata
agcagtaaaagaagtgtagatttggatggagagatagcaaaagttcaggatgttttgtta
gataatggcactggtagagttagagtttcgttttggaggggtaaaactgctttattagaa
aatataaaagaaggagatttggtgagaataacaaactgtagagtgaagacatactatgat
agagaagggaataaaagggctgatttagtggcaactgctgatactgaagttgttaaagat
gagagcattgaagccccagagtatgagctaaaatactgcaaaattgaagatatctataac
agagacgttgattggaacgatataaatttaatagcccaagttgttgaagattatggcatt
aatgaaattgaatttgagaatggcattagaaaagtaaggaatttaattttagaggatgga
actggaagaataaggttgagtttatgggatgatttagctgagatagaaattagagaggga
gatattatagaaattttacatgcctatgccaaggagagaggagattatatagatttagtt
cttggaaagtatggaagaataattataaatccagaaggggttgaaataaagagtaataga
aagtttatagccgatattgaagatggggaaacagttgaagttagaggagctgttgttaaa
atattgagcgacaatcttttcctttatctatgcccaaattgtaaaaagagggttgtggag
attgatggaatctataactgccctatttgtggagatgttgaaccagaggaaattttgaga
ttaaattttgttgtagatgatggaacaggaactttattgtgtagggcttatgatagaaga
gttgagaagatgttaaaaatgaggagagaagagttaaaaaatctaagtatagaaatggta
gaggatgagattttaggggaagaatttgttctatatggaaatgttagggtagagaatgat
gagttgattatagttgttagaagaattggctatgtagatgttgagaaagaaataaaaata
ttggaggagatggaatatagtcaatcatcaaactaa
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