Methanocaldococcus bathoardescens: JH146_0693
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Entry
JH146_0693 CDS
T03253
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mjh
Methanocaldococcus bathoardescens
Pathway
mjh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
JH146_0693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjh03019
]
JH146_0693
03009 Ribosome biogenesis [BR:
mjh03009
]
JH146_0693
04131 Membrane trafficking [BR:
mjh04131
]
JH146_0693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mjh04147
]
JH146_0693
Messenger RNA biogenesis [BR:
mjh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
JH146_0693
Ribosome biogenesis [BR:
mjh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
JH146_0693
Membrane trafficking [BR:
mjh04131
]
SNARE
SNARE associated proteins
Others
JH146_0693
Autophagy
Aggrephagy
Other aggrephagy associated proteins
JH146_0693
Exosome [BR:
mjh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JH146_0693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
AAA_2
TIP49
AAA_14
AAA_33
Vps4_C
AAA_22
nSTAND3
AAA_28
IstB_IS21
DUF815
Sigma54_activat
AAA_18
Mg_chelatase
AAA_7
RNA_helicase
AAA_17
AAA_24
ABC_tran
PhoH
Zeta_toxin
AAA_3
AAA_lid_PRS2_C
TsaE
Sigma54_activ_2
NB-ARC
Parvo_NS1
ATP-synt_ab
NPHP3_N
AAA_30
bpMoxR
SLFN-g3_helicase
ATPase
ResIII
AFG1_ATPase
Baculo_PEP_C
Perilipin
Molydop_binding
DUF2203
DUF1572
Abi_C
Glutaredoxin2_C
eIF3_N
Allexi_40kDa
APG6_N
DUF4788
COG3_N
LOH1CR12
Motif
Other DBs
NCBI-ProteinID:
AIJ05542
UniProt:
A0A076LFE8
LinkDB
All DBs
Position
696742..699453
Genome browser
AA seq
903 aa
AA seq
DB search
MVKELKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGTKGKAYAIVYRGFLEDAG
KGIIRIDGYLRQNAGVAIGDRVKVKKVELKEAKKVVLAPTQPIRFGPGFEDFVKRKIMGQ
VLSKGLKVTIGVLGTALTFVVVNTSPAGPVRVTDFTHVELKEEPVSEIKETKIPDVTYED
IGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGAN
FYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLV
AQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHT
RNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNL
KVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEK
IGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRK
ARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPD
IIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRGMNLAEDVNLEELAKKTEGYTGADI
EALCREAAMLAVRENIGKPWGIETALRDLINYLQSISGTFRGAAVELNSVIKATKERESA
EAGEFSELKNAVGRIINVLSPAKEKIEAVEKEVDNFLEIINKEDLKPSEKDEANKLAKYL
KDILGKLKEMIDNIYELENKLGSLSQQVSAEEIDEIIKTTQNIIHRFTTSLDELKNILKD
IESIRLRVSTKDVKIKKEHFMKALEKIKPSVSKEDMRVYEKLAQEYGRATSVEKKKEEGR
EVI
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagagctaaaagtcgctgaagcatatcaaggagatgtcgggaggggtattgca
agaatagacccttatacaatggaagaactcggcttaaaaccaggggatgttattgaaatt
gaaggaactaaggggaaagcttacgctatagtttatagaggtttcttagaagatgctgga
aaaggaattattagaattgatggttacttaaggcagaatgctggagtagctattggagat
agagtaaaagttaaaaaagtagagcttaaagaagcaaagaaagtagttttagccccaact
caaccaattagatttggtcctggatttgaagactttgttaagagaaagataatggggcaa
gttttaagtaaaggtttaaaagttaccattggagttttagggactgctttaacatttgtt
gttgttaatacatcaccagcaggacctgttagagtaactgactttacacacgttgagttg
aaagaagagccagttagtgaaattaaagaaactaagattccagatgttacatatgaagat
attggtggtttgaaagaggaagttaagaaagttagagagatgatagagcttccaatgaga
catccagagttgtttgaaaagttaggaattgaaccacctaagggagttttattagttgga
ccaccaggaactggtaagacattattggctaaagcagttgctaacgaagctggagcaaac
ttctatgtaattaatggtccagaaataatgagcaaatatgttggagaaacagaagagaat
ttaagaaagatatttgaagaagctgaagagaatgctccaagtataatattcattgatgaa
attgacgctatagcccctaaaagagatgaagctacaggagaagttgagagaagattagtt
gctcagctcttaaccttaatggatggattgaaaggaagaggacaagttgttgttattgga
gctactaacagaccaaatgcattagacccagctttaagaagaccaggaagatttgataga
gagattgttattggagttccagatagagaaggtagaaaagaaatcttgcaaatacacaca
agaaacatgccattagctgaagatgttgatttagattacttagcagatgtaacacatgga
tttgttggggctgatttagcagctttatgtaaagaggcagcaatgagggcattgagaaga
gtattgccaagtattgacttagaggcagaagagattccaaaagaagttttagataactta
aaagtcacaatggatgacttcaaagaggcattgaaggatgttgagccatcagcaatgaga
gaggttttagttgaagttccaaatgttaagtgggaagatatcggaggattagaggaggtt
aagcaagaattaagagaggcagtagaatggcctttaaaagctaaggaagtatttgaaaaa
ataggagttagaccacctaagggagtattgctatttggaccaccaggaacaggtaagaca
ttattagctaaggctgtagctaacgaaagtggagcaaacttcataagcgttaaggggcca
gaaatcttcagtaagtgggtaggggaaagtgaaaaggcaataagagagatattcagaaaa
gcaagacagtcagcaccatgtataatattcttcgatgagattgatgctatagcaccaaag
agaggtagagatttaagttcagcagttactgataaagttgtcaaccaattattaactgaa
ttggatggaatggaagaaccaaaggatgttgttgttattgctgcaacaaatagaccagat
atcattgacccagctttattgagaccaggaagattagatagagttatattagtcccagtt
ccagatgaaaaggcaagattggatatattcaagatacacacaagaggtatgaacttagcc
gaggatgtcaacttagaagagttagctaagaagactgaaggatacactggagctgatata
gaggcattgtgtagagaagcagcaatgttagcagttagagagaatataggaaaaccatgg
ggaattgagacagctttaagagatttaatcaactacttgcagagcatttcaggaacattc
agaggagcggctgtagagttaaacagtgtcattaaagctacaaaagagagagaatctgct
gaagcaggagagtttagtgagttaaagaatgctgttggaaggataattaatgtgttatca
ccagctaaggagaaaattgaagctgtagagaaagaagttgataacttccttgaaattata
aacaaagaggacttaaaaccatcagagaaagatgaagctaataagttagcaaaatactta
aaggacatattaggcaagttaaaagaaatgatagacaacatctacgaattagagaacaag
ttaggaagcttgtcacagcaagtttcagctgaagagattgatgagataatcaaaacaaca
caaaatatcatacacagattcacaacatcattggatgagctcaagaacatattaaaggat
attgaaagcataagattaagagtttcaacaaaagatgtcaaaattaagaaagaacacttc
atgaaagctcttgaaaagattaaaccatcagtaagtaaggaagacatgagagtttatgaa
aagttagctcaagaatatggaagagccacatcagttgaaaagaaaaaagaagaaggtaga
gaagtaatctaa
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