Methanocaldococcus bathoardescens: JH146_0900
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Entry
JH146_0900 CDS
T03253
Name
(GenBank) DNA-directed RNA polymerase, subunit B'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mjh
Methanocaldococcus bathoardescens
Pathway
mjh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JH146_0900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjh03021
]
JH146_0900
Enzymes [BR:
mjh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JH146_0900
Transcription machinery [BR:
mjh03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
JH146_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
KIX
Motif
Other DBs
NCBI-ProteinID:
AIJ05745
UniProt:
A0A076LBI1
LinkDB
All DBs
Position
complement(893576..896206)
Genome browser
AA seq
876 aa
AA seq
DB search
MFGLLSPDYIRQMSVAKIVTPDTYDEDGYPIDGGLMDTRLGVIDPGLVCKTCGGRIGECP
GHFGHIELAKPVIHIGFAKTIYKILKAVCPHCGKVAISETKRKEILEKMEKLERDGGNKW
EVCEEVYKEASKVTICPHCGEIKYDIKYEKPTTYYRIDGNEEKTLTPSDVREILEKIPDE
DCILLGLNPEVARPEWMVLTVLPVPPVTVRPSITLETGERSEDDLTHKLVDIIRINNRLE
ENIEGGAPNLIIEDLWNLLQYHVNTYFDNEAPGIPPAKHRSGRPLKTLAQRLKGKEGRFR
YNLAGKRVNFSSRTVISPDPCLSINEVGVPEVVAKELTVPEKVTKYNIERIRKLLKNGSE
KHPGVNYVIRKMVGRDGTEQEFKVKITESNKDFWAENIREGDIVERHLMDGDIVLYNRQP
SLHRMSIMAHRVRVLPYRTFRHNLCVCPPYNADFDGDEMNLHVPQSEEARAEAEALMLVE
KHILSPRFGGPIIGAIHDFISGAYLLTSNYFTKDEATLILRSGGIKDELWEPDKIENGVP
LYSGKKIFSKALPKGLNLRYKAKICRKCDVCKKEECEYDAYVVIKDGELIKGVIDKNGYG
AEAGLILHTIVKEFGPEAGRKFLDSATKMAIRAVMLRGFTTGIDDEDLPEEALKEIEKVL
DEAEEKVKEIIEKYERGELELLPGLNLEESREAYISNVLREARDKAGAIAERYLGLDNHA
VIMAVTGARGNILNLTQMAACLGQQSVRGKRIFRGYRGRVLPHFEKGSLDAKSHGFVRSS
YKKGLSPTEFFFHAMGGREGLVDQAVRTAQSGYMQRRLINALQDLKTEFDGTVRDSRGIM
IQFRYGEDGIDPMLADRGKSVNIDRIIDKVKMKYNK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtttgttatctccagattacataaggcagatgtcagtggctaagatagttaca
ccagacacttacgatgaagatggttatccaatagatggaggtttaatggacacaagatta
ggggttatagaccctggtttagtttgtaaaacatgtggaggaaggattggagagtgtcca
ggacattttgggcatatagagttagctaagccagttatacatattggatttgctaaaaca
atatataagatattaaaagctgtttgtccacactgtggaaaagtagcaataagtgagact
aaaagaaaagaaattttagaaaagatggaaaaattggagagagatggtggaaataagtgg
gaagtttgtgaagaagtttataaagaagcttcaaaagtaaccatctgcccacattgtgga
gagattaagtatgatataaagtatgagaagccaacaacctactatagaattgatggtaat
gaagaaaaaacactaaccccatcagatgttagagaaattttagagaaaattccagatgaa
gattgtattttacttggcttaaacccagaagttgcaagaccagaatggatggttctcaca
gttttaccagttccaccagtaactgtaagaccatcaattaccttagaaactggagaaaga
agtgaagatgacttaactcacaaattagttgatatcattagaattaacaatagattagaa
gagaatatagaaggaggggcaccaaacttaattattgaagatttgtggaatctcttacaa
tatcacgtaaatacctacttcgataacgaagctccaggaattccaccagctaagcataga
agtggaagaccattaaaaacattagctcagagattgaaaggtaaagagggaagatttaga
tacaacttagctggtaagagggttaacttctcatcaagaactgtaatttccccagaccca
tgcttaagtattaatgaagttggagtccctgaagttgtagctaaagagctaacagttcca
gaaaaggtaacaaaatacaacattgaaagaataagaaaattattaaagaatggttcagag
aaacacccgggggttaattacgttataagaaagatggttggtagggatggaacagagcaa
gaatttaaggttaagataactgaaagcaataaagatttctgggcagagaatataagagaa
ggagatattgttgagagacatttaatggatggagatatcgttttatacaacagacagcca
tcattacacagaatgtctattatggctcatagagtaagggttttaccatacagaacattt
agacacaatttatgtgtttgtccaccatataacgctgacttcgatggagacgagatgaac
ttacacgttcctcagtcagaagaagcgagagcagaagcagaggctttaatgcttgtagag
aaacacatcctttccccaagatttggagggccgattattggggctatacatgactttatc
tcaggagcttatctcttaacttcaaactacttcacaaaggatgaagctaccctaatttta
agaagtggtggcattaaggatgaattatgggagccagataagatagagaatggagtccca
ttatactcaggtaagaagatattcagtaaagcattaccaaaaggattgaatttgagatat
aaggcaaagatttgtagaaagtgtgatgtttgtaaaaaagaggaatgtgaatacgatgct
tatgttgtaataaaagatggagaattaattaaaggagttattgataaaaacggttatggg
gcagaggcaggtttaattttacacacaatagttaaagagtttggtccagaagctggaagg
aaattcttggattcagctactaagatggcaataagggcagtgatgctaagaggatttaca
acaggtattgacgatgaggatttaccagaagaagcattaaaagagattgaaaaagtttta
gatgaggcagaagagaaagttaaagaaattattgagaaatatgaaagaggagaacttgaa
ttgcttccaggtttaaacttagaagaatcaagagaggcatatataagcaatgttttaaga
gaggcgagagataaggcaggggctattgctgagagatacttaggtttagataaccatgcg
gttatcatggcagttactggagcaagaggtaatatattaaacttaacacagatggcagca
tgtttagggcagcagtcagttagaggtaaaagaatctttagaggttatagaggtagagta
ttgcctcacttcgaaaagggaagcttggatgcaaaatctcacgggtttgttagaagtagt
tataagaaagggttaagtccaacagaattcttcttccacgctatgggaggtagagaaggt
ttagttgaccaggcggttagaacagctcagtctggttacatgcagagaagattaattaac
gctctacaagatttaaaaacagaatttgatggaacagttagagattcaagaggaattatg
attcagtttaggtatggagaggatggaattgacccaatgcttgctgatagaggaaaatca
gtaaatatcgatagaataatcgataaggttaagatgaaatataacaaataa
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