Methanocaldococcus bathoardescens: JH146_0901
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Entry
JH146_0901 CDS
T03253
Name
(GenBank) DNA-directed RNA polymerase, subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mjh
Methanocaldococcus bathoardescens
Pathway
mjh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JH146_0901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjh03021
]
JH146_0901
Enzymes [BR:
mjh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JH146_0901
Transcription machinery [BR:
mjh03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
JH146_0901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Zf_2nd_IFT121
DUF5817
Motif
Other DBs
NCBI-ProteinID:
AIJ05746
UniProt:
A0A076LC56
LinkDB
All DBs
Position
complement(896394..898295)
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AA seq
633 aa
AA seq
DB search
MVSREVNIYVNGKLVGTTDKPEELVNFIKEARRKGELPQYTTVAYYEESNDIHINTDAGR
IVRPLIVVENGKPKLTKEHIEKLRNGEITFSDLVKEGVIEYLDAEEEENAYIALSEEELT
EKHTHLEIDPLTILGIGAGVAPYPEHNSAPRITMAAAMGKQSLGIPMSNIKWRLDTRGHY
LHYPQVPIVRTKHQEILGFDKRPAGQNFVVAIMSYEGYNMEDAIVFNKSAIDRGLGRSTF
FRTYDACERRYPGGQMDRFEIPDKGVRGYRSEEAYKYLEEDGIAAVEAHVKGGDVIVGKT
SPPRFLEEHEITIQVKPQRRDSSVVVRHGEEGYIDKVILTETKEGNRLVKIKVRDLRIPE
LGDKFASRHGQKGVIGLTVPQEDLPFTESGIVPDIIINPHAIPSRMTVGQLLEMLGGKVG
ALEGRRIDGTIFSGEKEWDLRKALEALGFKHHGKEVMYDGKTGKKFEVEIYIGIAYYQKL
HHLVAGKIHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMLLKERLMDES
DPYDICICSKCGDFAILDYKRNIKYCPICGEIENLYNSKKIPFVRIPYAFKLLLDELKSM
CILPKLKVKDKVELEDFEEFVEKLEKEKVEQKQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
ttggtatcaagggaagtaaatatttatgttaatggaaagttagttggaactacagacaaa
ccagaagaacttgttaattttattaaagaagcgaggagaaaaggagaacttcctcaatac
acaactgttgcatattacgaagagagtaatgatattcacataaacacggatgctgggaga
attgttagaccattaatagttgtagagaatggaaaaccaaaattaactaaagaacatatt
gaaaaattaagaaatggggaaattacattctcagatttagttaaagaaggggttattgag
tatttagatgctgaagaagaggagaatgcttatatagctttatctgaagaagagctgaca
gaaaaacacacccacttagagatagacccactcacaatattaggtattggggcaggggtt
gctccttacccagagcacaactctgctccaagaattacaatggctgcggcaatggggaag
cagtcattaggaattccaatgagtaacataaaatggagattggacacaagagggcattac
ttacattatccacaagtgccaattgttaggacaaaacaccaagagattttaggtttcgat
aaaagaccagcaggacagaactttgttgtagccattatgagctatgaaggatacaacatg
gaggatgctatcgtctttaataaatcagctattgatagaggtttaggaagaagcacattc
tttagaacttacgatgcatgtgagagaaggtatcctggaggacagatggatagatttgag
attcctgataagggagttagaggttataggtcagaagaagcttataaatacttagaagag
gatggaattgccgctgtagaagctcatgtaaaaggtggagatgtaattgttggtaaaacc
tctcctccaaggttcttagaggagcatgagataacaattcaagttaaaccacagagaagg
gattcatcagtcgttgtaagacatggagaggaaggttatattgataaagttatactaact
gaaacaaaagaaggaaataggttggttaagattaaagttagagatttaagaattccagag
cttggagataagtttgcttcaagacacgggcagaaaggggttatagggcttacagttcca
caggaagatttgcctttcactgagagtggaatagttcctgatatcataattaatccacac
gcaattccatcaagaatgaccgttgggcaattgttggaaatgcttggaggtaaggttgga
gctttagaaggaagaaggatagatggaactatattcagtggagagaaggaatgggattta
agaaaagctttagaggctttaggatttaagcaccatggtaaagaagttatgtatgatggt
aagacagggaaaaagtttgaagtagagatttatattgggatagcatactaccagaaatta
caccacttagtagctggaaagatacacgcaagaagtagaggacctgtccaagtattgaca
agacaaccaacagaaggaagagcaagggaaggaggtctaagatttggagagatggagagg
gacgttttaattggtcatggagcagctatgctattaaaagaaaggcttatggatgaatca
gacccttacgatatctgtatatgttcaaaatgtggggactttgctatattagattacaag
agaaacataaaatactgtccaatatgtggtgaaattgaaaatctctataattccaagaag
attccatttgttagaataccttatgcatttaagttgttgttagatgagttgaagagtatg
tgtatcttaccaaaacttaaagttaaagataaagttgaattagaagattttgaggagttt
gttgaaaagttagaaaaagaaaaagttgagcagaaacaataa
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