Methanocaldococcus bathoardescens: JH146_1206
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Entry
JH146_1206 CDS
T03253
Name
(GenBank) Pre-mRNA processing ribonucleoprotein, binding domain protein
KO
K14564
nucleolar protein 56
Organism
mjh
Methanocaldococcus bathoardescens
Pathway
mjh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JH146_1206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mjh03009
]
JH146_1206
Ribosome biogenesis [BR:
mjh03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
JH146_1206
Prokaryotic type
JH146_1206
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Nop5_N
Nop5_56-rel_N_Arc
PlcR
TipAS
U3_assoc_6
BAR1_C
Motif
Other DBs
NCBI-ProteinID:
AIJ06048
UniProt:
A0A076LHW2
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All DBs
Position
complement(1191852..1193135)
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AA seq
427 aa
AA seq
DB search
MLFLYIKSYGGIILIYVAFTPYGAFGVKDDRIVNSLDDIEYKKLFNEEEIPDIMFKLKTQ
PNKIADELKEEWGDEVKLETLSVEPFNIGEFLRNNLFEVGKELGYFNNYDEFRKKMHFWS
TELTKKVIKSYAQQKDKIIIQVAEAISDLDKTLNLLSERLREWYSLYFPELDHLVNKHEV
YANLVTNLKKRENFTKSQLKKILPSKLAGKIAEAAKNSMGGELEDYDLNAIVKFAEEISH
LYEKRKELYNYLEKLMNEEAPNITKLAGVSLGARLIGLAGGLEKLSKMPASTIQVLGAEK
ALFAHLRTGAEPPKHGIIYNHPLIQGSPHWQRGKIARALACKLAIAARADYAGDYIADEL
LEKLNKRVEEIKRKYPKPRKKKKKEKPKAKKKEKKGKKEKPKKKKDKKKDKKGKMERKVI
GKTKSRK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttatatataaaaagttatggagggattattttgatttatgttgctttcaca
ccttatggagcttttggagttaaagatgatagaatagttaatagcttagatgacatagaa
tataaaaaattgtttaatgaggaagaaattccagatataatgtttaaattaaaaactcag
ccaaataaaatagcagatgagttgaaagaagaatggggagatgaagttaaattagaaacc
cttagtgttgagccatttaatataggagagtttttaagaaacaacttatttgaagttgga
aaagaattgggatacttcaataactatgatgaatttagaaagaagatgcatttttggagt
actgaattaacaaaaaaagttataaagagttatgctcagcaaaaggataaaatcattatc
caagttgcagaagcaatatctgatttggataaaactctaaacttattatctgagagattg
agagagtggtattccctctacttcccagagttagaccacttagttaataaacatgaagtt
tatgccaacttagtaacaaatttaaaaaagagagaaaactttacaaagagtcagttaaaa
aagatactaccatcaaaattagctggaaaaattgctgaagcggcaaaaaattcaatggga
ggagagttggaagattatgatttgaacgctattgttaaatttgctgaggaaataagtcac
ctatatgaaaagaggaaagagctatataactatttagagaaattgatgaatgaagaggcc
ccaaatatcacaaaactcgctggtgtttccttaggagcgagattaataggtttagctgga
gggttggaaaaattatctaagatgcctgcttcaacaatacaagttttaggagctgagaaa
gctttattcgctcacttgaggactggagctgaaccgccaaaacatggtataatttataat
catcctttaattcaaggttccccacattggcaaagagggaagatagcaagagctttagct
tgcaaattagctatagctgcaagggctgattatgctggagattacatagcagatgaactc
ttagaaaagttaaataagagagttgaagagattaaaaggaagtatccaaaacccagaaag
aaaaagaagaaagaaaaacctaaagcaaagaaaaaagaaaagaaaggtaagaaagaaaaa
cctaagaaaaagaaagataagaaaaaagacaaaaaaggcaaaatggaaagaaaagttata
ggaaaaacaaagagtaggaaataa
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