KEGG   Methanocaldococcus bathoardescens: JH146_1230
Entry
JH146_1230        CDS       T03253                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
mjh  Methanocaldococcus bathoardescens
Pathway
mjh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mjh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JH146_1230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mjh03019]
    JH146_1230
   03009 Ribosome biogenesis [BR:mjh03009]
    JH146_1230
Enzymes [BR:mjh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     JH146_1230
Messenger RNA biogenesis [BR:mjh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     JH146_1230
Ribosome biogenesis [BR:mjh03009]
 Prokaryotic type
  rRNA helicases
   JH146_1230
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Utp25_C Cas3-like_C_2 AAA_22 AAA_19 AAA_30 Flavi_DEAD
Other DBs
NCBI-ProteinID: AIJ06072
UniProt: A0A076LGV0
LinkDB
Position
1215822..1216910
AA seq 362 aa
MNFNELNLSDSILNAIKNKGFEKPTDIQMKVIPLFLNDECNIVAQARTGSGKTASFAIPL
IELVNENNGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALKRAN
IVVGTPGRILDHINRGTLNLENVKYFILDEADEMLNMGFVEDVEKILNACNGDKRILLFS
ATMPKEILNLAKKYMGDYNFVKAKINANIEQSYVEVNENERFEILCRILKNKEFYGLVFC
KTKRDTKELANMLRDIGFKAGAIHGDLNQSQREKVIRLFKQKRIKILIATDVMSRGIDVN
DLGYVINYHLPQNPESYMHRIGRTGRAGKKGKAISIINRKEYKKLKYIERAMKLKIRKLK
IK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaattttaatgaattaaatttatcagatagtatcctaaatgccattaagaataaaggt
tttgaaaagccaacagacatacagatgaaggttattccgttatttttaaatgatgaatgt
aatattgtagctcaagcaaggactggaagtgggaagacagcatcatttgcaattccatta
attgagcttgtcaatgaaaacaatggaatagaggcaattattctaaccccaacaagagaa
ttggctatacaagtggctgatgaaatagagtcattaaaaggtaacaaaaatttaaagata
gctaaaatttatggtggaaaagctatttatccacaaattaaagctttaaagagagcaaat
atagttgttggaaccccaggaagaattttagaccacataaatagaggcactttaaattta
gaaaatgttaaatactttatattggatgaagctgatgaaatgctcaatatgggatttgtt
gaggatgttgaaaagattttaaacgcctgtaatggagataaaaggattctgttgttctct
gcaaccatgccaaaggagatattaaatttggctaaaaagtatatgggagattataacttt
gtaaaagctaagataaatgcaaatattgagcagagttatgttgaagttaatgaaaatgag
agatttgaaatcttatgtagaattttaaaaaataaggaattttatggattagttttttgt
aaaactaagagagatactaaagaattggcaaatatgttgagagatattggatttaaagct
ggtgcaattcatggagatttaaatcaatctcaaagagagaaagttataaggctattcaaa
caaaagagaattaaaattttaattgccactgatgttatgagtagaggaatagatgttaat
gatttaggttatgtaattaactaccatcttccacaaaatcctgaatcttatatgcatagg
attggaagaactggaagagctggaaaaaaaggaaaggcaatatcaattatcaatagaaaa
gaatataagaaattgaaatatatagagagagcaatgaaattgaaaattagaaaattaaaa
attaaataa

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