Methanocaldococcus bathoardescens: JH146_1477
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Entry
JH146_1477 CDS
T03253
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mjh
Methanocaldococcus bathoardescens
Brite
KEGG Orthology (KO) [BR:
mjh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjh03032
]
JH146_1477
03400 DNA repair and recombination proteins [BR:
mjh03400
]
JH146_1477
Enzymes [BR:
mjh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JH146_1477
DNA replication proteins [BR:
mjh03032
]
Prokaryotic type
DNA Topoisomerases
JH146_1477
DNA repair and recombination proteins [BR:
mjh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JH146_1477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Intein_splicing
Toprim
DUF1272
Hint
DmmA-like_C
ADK_lid
DUF2310
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AIJ06319
UniProt:
A0A076LKY0
LinkDB
All DBs
Position
complement(1434886..1438293)
Genome browser
AA seq
1135 aa
AA seq
DB search
MTALIICEKPSVAKKIANALGKAKKKSIDGVPYYELERNGKKIIVASAVGHLFTLVEKEN
KEFGSYPVFDIKWVPASVEKGKEYVDKYIKALKKLSKEADEFYIATDWDIEGELIGYHAL
KYCCGREKAKRMRFSSLTKKEIVKAFENPDEIDYGLVDAGESRHIVDWYFGINLSRALMN
AIRAVNRWKTMSIGRVQGPALAFLTERELEIKKFVPKPYWVIEALFKGNLKAIHEKEKFW
DEKEAKSVYEKIKDEKFGKVVEIKKTKRKIKPLPPFDLGTLQREAYSYFKISPKETQEIA
QKLYEKGLCLHPDTLILLPDGIKKIKDLDDEGEILCLNKDLKLTKSKYKLLKRTIKEKLI
KITLNDGTKLITTKEHPILVYRDELIFIPAEKLKENEQVVMFINNSEKTFKIKKTGFVDY
ILENKKYSHHYSIIYASDWKNKFKSGIAKKFDLSNQLSKNKGLSLDRLRKLSNYIIDRDL
KRIANGDVYIQKIKKIEELEYEGEVYDLTVENYHNFIANGIVVHNCSYPRTSSQKLPKDR
KYLEDILNIIKNHPVYGKWAERILKENLKPVEGKKEDPAHPAIHIVDIPKEELSEKEKKI
YDLIARRTLAAFWDNAEREYLNIKVDIKGEKFKLSGSRTVKEGWHEIYHFPKFDEIELPA
LKKNDIIKVEKITITRKETQPPKRYTVASIIKELEKKGLGTKCLTSNTLIKVKIGSEIKH
IKIEELFELLNDKYKEKDIELAVNNKGIKCFSFNYKDEVESSFEFISRRKLERDESVYRI
RFEDGSFIEVTEKHPILIYDNGDFRYVKAKDLKKGMKVVSSIKYIGEEVINKDFITKTIS
SIRKIKYNGYVYDIINSEYSNFIANNIVVHNSTRAEIVDKLIKRGYVIDDGSLKVTDLGI
SVIETLKRFCPEIIDEKMTRDLEEKLEKIQFRKIKKDDVLEEAEKRLRKILEEFKKKEED
IGIYLIKNLDATNKKGKIVGKCPKCGGDLILIRYKKGRFVGCSNYPECDVKYSLPDKGRI
KIPNKVCEVCKSPILKIGDREVCINPECPLKQVEVKEENRKCPKCGGDLILKKGIYGAFY
GCSNYPKCKYTESINKKEVVGKCPKCGGDLVVRDGKFGKFVGCSNYPKCKYTEKL
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattaataatctgtgaaaagccgagtgttgctaaaaagatagcaaacgcttta
ggaaaggctaagaaaaaaagcattgatggagttccatattatgaattagaaagaaatgga
aaaaaaattattgttgcaagtgctgttgggcatctctttactttagttgaaaaggaaaat
aaggaatttggttcctatcctgtttttgatataaaatgggtgcctgcgagtgttgaaaaa
ggaaaagagtatgtagataaatacataaaagcattaaaaaaactctcaaaagaggcagat
gagttctatattgccacagattgggatattgaaggggagttaattggttatcatgcatta
aaatattgttgtggtagagaaaaagcaaagagaatgagattctcatccttaacaaaaaaa
gagatagttaaagcttttgaaaatcctgatgaaattgattatggcttagttgatgctgga
gagagtaggcatattgtagattggtattttggaataaatttatcaagggctttaatgaac
gccataagggcagtgaatagatggaaaacaatgagtattggtagagttcaaggtcctgca
ttagcttttttaactgaaagagagttagaaattaaaaaattcgttcctaaaccatattgg
gttattgaagctctatttaaaggtaatttaaaagctatacatgagaaagagaaattttgg
gatgaaaaagaggcaaaaagtgtttatgaaaaaataaaagatgaaaaatttggtaaggtt
gttgaaataaagaaaactaaaagaaagataaaaccacttccaccttttgacttaggaact
ttacagagagaagcttacagttattttaaaatatcaccaaaggaaacgcaagaaattgcc
caaaagctttatgagaaagggctttgcttacatccagatacattgatattattgccagat
ggaattaaaaagattaaagacttagatgatgagggagagattttatgtctaaataaagac
ttaaaattaacgaaatcaaaatataaacttttaaaaagaactataaaagaaaaactgata
aaaattactttaaatgatggaaccaaacttattactacaaaggagcatccaattttagtt
tatagggatgagctaatatttataccagctgaaaaattaaaagaaaatgagcaagtagtg
atgtttataaataattcagaaaagacatttaaaattaaaaaaactggatttgttgattat
atattagaaaataaaaaatattctcatcattatagtattatctatgcttcagattggaaa
aataagtttaaatctggaattgcaaagaaatttgacctatctaaccaattatcaaaaaat
aaaggtctaagtttagatagattaagaaagttatctaattatatcatagacagagattta
aaaagaattgctaacggggatgtttatattcaaaaaatcaaaaaaattgaagaacttgaa
tatgaaggagaggtttatgatttaacagttgaaaattatcacaactttatagcaaatggt
atagttgtgcataactgttcatatccaagaacatccagccaaaaacttccaaaagataga
aagtatttggaagatattctaaatataataaaaaatcatccagtttatggaaaatgggct
gagagaattttaaaagagaatttaaaaccagttgaaggaaagaaagaagaccctgcacat
cctgcaatacatattgtagatattccaaaagaagaactttcagagaaagaaaagaaaatt
tatgatttaatagcaagaagaactttagccgctttttgggataatgcagagagagaatat
ctaaatataaaagttgatattaaaggagagaaatttaagctatctggttcaagaactgta
aaagaaggttggcatgagatatatcacttcccaaaatttgatgagattgagttgccagca
ttaaagaaaaacgatataatcaaagttgaaaagataacaataacaagaaaagaaacacag
ccaccaaaaagatataccgttgcaagtattataaaagaattagaaaagaaagggttagga
acaaaatgtttaacttcaaatacattaattaaagttaaaattggtagtgaaattaagcat
ataaaaattgaagaactatttgagttgctaaatgacaaatataaagaaaaagacattgaa
ttagcagtaaataacaaaggcataaaatgtttctcatttaattataaagatgaagttgaa
agtagttttgaatttatcagtagaagaaaattggaaagagatgagagtgtctataggatt
agatttgaggatggcagttttattgaagttacagaaaagcatccaattttgatatacgat
aatggagattttagatatgttaaagccaaagatttgaaaaaaggtatgaaggtagtatca
tctataaagtatattggtgaagaagtaattaacaaagatttcatcacaaaaaccatctca
agtattagaaaaatcaagtataatggatatgtttatgatatcataaattcagaatattca
aactttattgcaaataatattgttgttcataactcaacaagagcagagattgtagataaa
ctaataaaaagaggttatgttattgatgatgggtctttaaaagtaactgatttagggatt
tcagtaattgaaacattaaaaagattctgcccagaaattattgatgaaaagatgacaaga
gatttagaagaaaagttagaaaaaatacagtttagaaaaattaaaaaagatgatgtttta
gaagaggcagaaaaaagattgagaaaaatattagaagagtttaaaaagaaagaagaagat
attggaatctatcttatcaaaaacttagatgctacaaataaaaaaggaaaaattgttgga
aaatgtccaaagtgtggaggggacttaattttaataagatacaaaaagggtaggtttgtt
ggttgctctaactatcctgaatgtgatgtaaaatattctcttccagataagggtagaata
aaaattccaaacaaagtttgtgaggtatgcaaatcccctattttaaaaattggagataga
gaggtttgtattaatccagaatgtcctttaaagcaagttgaagttaaagaagaaaacaga
aaatgtccaaaatgtggaggggatttgattttaaagaaagggatttatggagcattttat
ggttgttcaaattatccaaagtgtaaatacacagaatcaataaataaaaaagaggttgta
ggaaaatgccctaaatgtggaggagatttagttgttagagatggaaaatttggaaagttt
gttggttgctctaactatccaaaatgtaaatacactgaaaaactataa
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