KEGG   Microbacterium jiangjiandongii: QNO14_01580
Entry
QNO14_01580       CDS       T11126                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mji  Microbacterium jiangjiandongii
Brite
KEGG Orthology (KO) [BR:mji00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mji03400]
    QNO14_01580
Enzymes [BR:mji01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QNO14_01580
    5.6.2.6  RNA 3'-5' helicase
     QNO14_01580
DNA repair and recombination proteins [BR:mji03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    QNO14_01580
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_3rd_Lhr WHD_4th_Lhr WHD_2nd_Lhr DEAD Helicase_C ResIII GntR
Other DBs
NCBI-ProteinID: WIM25770
LinkDB
Position
complement(351396..356216)
AA seq 1606 aa
MDDVLARFGPATQDWFRSAFPRPTDAQIGAWDAISHGKHALVVAPTGSGKTLSAFLWAID
RVFHEKPPPADAGNGASPAPRGRRARREPSTGTSVLYISPLKALGVDVERNLRSPLVGIG
QSARRLGLTVPEVTVGVRSGDTPSSDRRKLVADPPDILITTPESLYLMLTSQAGLTLRNV
HTVIVDEVHAVAATKRGAHLAVSLERLEALRREHAEDAATLAPAQRIGLSATVRPIDEVA
RFLGGSAPVEIVAPRATKAFDLRVVVPVDDMLNPPPPPGAAEPPDAAADDDAAKTDAGGD
GDWFAPSARPRPTGESTEATGSVWPHVEEAIVDRILAHRSTIVFANSRRLAERLTGRLNE
IYAERLGLEPPAPAVPAQMMAQAGSTAGVEPVLAKAHHGSVSKEARAQVEDELKSGLLRC
VVATSSLELGIDMGAVDLVIQVEAPPSAASGLQRVGRAGHQVGEVSRAALFPKHRGDVLH
TAVVTERMLAGQIEAIAVPQNPLDILAQQTVAACAIGPIDVEGWFDTVRRSAPFRTLPRS
AYEATLDLLAGRFPSDEFAELRPRIVWDRDHGTLTGRPGAQRIAVTSGGTIPDRGLFGVF
VAGESRNARVGELDEEMVYESRVNDVFTLGTTSWRIVEITHDRVNVVPAFGQPGKLPFWH
GDGLGRPAELGEALGRFSREVSAAPHDKAVARLTESGLDDNAIGNLLGYLAEQREATGSL
PTDRTLTVERGRDEVGDWRIILHSPYGMHVHAPWALAVNARIRERLGVEGAAVASDDGII
ARVPDAATEPPGADLFVFDPEELEQIVTDEVGGSALFASRFRECAARALLLPRLNPQKRA
PLWQQRQRSAQLLEVARRHPTFPIILETLREVLQDVYDLPALLRIARSIGDRRIRLVETD
PASPSPYARDLLFGYVGAFMYEGDSPLAERRAAALSVDPALLAELLGKIEMRELLDPDVI
AQFEREVQRLDPERRARGVEGVADLLRLLGPLDAAEVADRLDVEGAGDGAAAAEATGHLE
SLVQTRRAIRVTIGGAERVAAIEDAARLRDALGTALPVGLPTAFLEPVADPLADLVARHA
RTHGPFRASDVAVRLGLGQAVARQALQRLESQGRVQSGFFLPDPGGRGTTSAAADEGEWC
DTEVLRRLRMRSLAAIRGSVEPVSPEAYARFLPVWQHVTRPLEGLDGVVAVVEQLAGVPI
PASAWESLILPSRVRDYAPGMLDELTATGEILWSGHGSLPGRDGWIALHVADTAPLTLLA
PDDDAETGEADPDALAERIVAALTSGGAYFASQLRQLTDAENEQSVIEALWDLTWRGRVT
NDTFAPVRTLLGGGSQAHRTARRTPRARLYRGMALPRPGATPPRPPALGGRWSLLPEAEP
DASARATATASLLLDRYGVVTRGSVQAEGVPGGFAQTYRVLAGFEEAGHCRRGYVIEKLG
AAQFAASATVDRLREFAGLSDPAPLKAVTLAATDPANPYGAALAWPPLDGVTHRPGRKAG
GLVVLVDGALTLYLERGGRSALAFTDDEAQLAAAAAHLAETSRTRRLDTLTIEQVNGEFV
YGTAVGRALRSAGFVEATRGLTLRKVTAGTALRQPQATAHTGAADA
NT seq 4821 nt   +upstreamnt  +downstreamnt
gtggacgacgtgctcgcgcgattcggtcctgccacgcaggactggttccgcagcgccttc
ccccggccgaccgacgcgcagatcggtgcatgggacgcgatctcgcacggcaagcacgcg
ctcgtcgtggccccgaccggctccggcaagacgctgtcggcgttcctgtgggccatcgac
cgcgtcttccacgagaagcctccaccggcggatgccggcaacggcgcttcccccgcgccg
cgcggccggcgtgcccggcgggaaccgtcgaccggcacgagcgtgctctacatctcgccg
ctgaaggcgctcggcgtcgacgtcgagcggaacctccgctccccgctcgtgggcatcggg
cagtccgcccggcggctgggcctcaccgttcccgaggtgacggtgggcgtgcgctccggc
gacacgccgtcgagcgaccgccgcaagctcgtcgccgaccctccggacatcctcatcacc
acccccgagtcgctgtacctcatgctcaccagccaggccgggctgacgctgcgcaacgtc
cacaccgtcatcgtcgacgaggtgcacgccgtggcagccactaagcgcggtgcgcacctg
gcggtcagcctcgaacgcctcgaggccctgcgacgggagcacgccgaggatgccgcgacc
ctcgcccccgcccagcgcatcggcctgtcggccacggtgcgcccgatcgacgaggtcgcc
cggttcctcgggggctcggcgccggtggagatcgttgcgccgcgggcgacgaaggcgttc
gacctgcgcgtcgtggtgcccgtcgacgacatgctgaacccgccgcctccccccggcgcg
gccgagccgcccgacgccgccgccgacgacgacgccgccaagaccgacgcgggcggcgac
ggcgactggttcgcgccgtcggcccggccccggccgacgggggaatccaccgaggcgacc
gggtccgtctggccccacgtcgaagaggcgatcgtcgaccgcatcctggcgcaccgctcg
accatcgtcttcgccaactcccggcgcctcgccgagcgcctcaccgggcgcctcaacgag
atctacgcggaacggctgggcctcgagccgcccgcccccgccgtccccgcgcagatgatg
gcacaggcgggctcgaccgccggggtcgagccggtgctcgcgaaggcgcaccacgggtcg
gtgtcgaaagaggcgcgcgcccaggtcgaggacgagctgaagtccgggctgctgcgctgc
gtcgtggcgacgagctccctcgaactcggcatcgacatgggcgcggtggatctcgtcatc
caggtcgaggcgccgccgtcggcggcatccggtctgcagcgagtgggtcgcgccggccac
caggtgggcgaggtgagccgggcggccctcttccccaagcaccgcggcgatgtgctgcac
accgcggtggtgaccgagcgcatgctcgccggtcagatcgaggcgatcgcggtgccgcag
aacccgctggacatcctggcccagcagacggtcgccgcctgcgccatcggcccgatagac
gtcgagggctggttcgacaccgttcgccgcagcgcgccgttccgcacgctcccccgctcg
gcatacgaggcgaccctcgacctgctggcggggcgcttcccctcggacgaattcgccgag
ctgcggccccgcatcgtctgggaccgcgaccacggcacgctcaccggacgcccgggagcc
cagcgcatcgccgtgacgagcggcggcacgatccccgaccgtggcctgttcggcgtgttc
gtcgccggagagtcccgcaacgcccgcgtcggcgagctcgacgaggagatggtctacgag
tcgcgcgtcaacgacgtgttcaccctcggcacgaccagctggcgcatcgtggagatcacc
cacgaccgcgtcaacgtggtccccgcgttcgggcagcccggcaaactgccgttctggcac
ggcgacggcctcggtcgtccggccgagctgggcgaagccctcggcaggttctcgcgcgag
gtctcggcggcaccgcacgacaaggccgtcgcacgcctgaccgagtcgggtctcgacgac
aacgccatcggcaacctgctcggctacctcgccgagcagcgcgaagccaccgggagcctg
cccaccgaccgcacgctcaccgtcgagcgcggccgcgacgaagtcggcgactggcgcatc
atcctgcattccccgtacggcatgcacgtgcacgcgccgtgggcgctggcggtcaacgcc
cgcatccgtgagcgcctgggcgtcgagggcgcggcggtcgcgagcgacgacggcatcatc
gcgcgtgtgccggatgccgcgaccgagccgcccggcgccgacctcttcgtcttcgacccc
gaggagctcgagcagatcgtcaccgacgaggtcggcggctcggccctgttcgcctcgcgc
ttccgcgagtgcgcggcgcgggccctgctgctgccgcgcctgaatccgcagaagcgcgcg
ccactctggcagcaacgccagcggtcggcccagctgctggaagtcgcgcggcggcatccg
acgttcccgatcatcctcgagaccctccgcgaggtgctgcaggacgtctatgacctcccc
gccctgctgcgcatcgcccggtcgatcggcgaccgccgcatccgtctcgtcgagacggac
cccgcctcgccgtcgccctacgcccgcgatctgctgttcggctacgtcggcgcgttcatg
tacgagggcgactcgccgctggccgagcggcgcgccgccgccctgtcggtcgacccggcc
ctgctggcggagctgctcggcaagatcgagatgcgggagctgctcgaccccgacgtcatc
gcgcagttcgaacgggaggtgcagcggctcgaccccgagcgtcgcgcccgcggtgtcgag
ggcgtcgccgacctgctgcggctactcggccccctggacgccgccgaggtcgccgaccgg
ctcgacgtcgaaggcgccggcgacggcgccgctgccgccgaagccaccggccacctcgag
tcgctcgtgcagacacggcgggcgatccgcgtcacgatcggcggggcggagcgggtggcg
gcgatcgaggatgccgcgcgcctgcgcgacgccctgggcaccgccctgcccgtcgggctc
ccgacggcgttcctcgagcccgtcgccgatccgctggccgacctcgtcgcccggcacgcc
cgcacgcacgggccgttccgcgcgtccgacgtcgccgtgcggctcgggctcgggcaagcc
gtcgcccggcaggcactgcagcgactggagtcgcagggccgggtccagagcggcttcttc
ctccccgacccgggtggacgcggcacgacgtccgcggcggcggacgagggcgagtggtgc
gacaccgaggtgctgcggcggttgcgcatgcgatcgctcgccgcgatccgcggcagcgtg
gagccggtctcgcccgaggcgtatgcgaggttcctgccggtatggcagcacgtcacccgc
cccctcgaaggactcgacggggtcgtcgcggtcgtcgagcagctcgccggcgtgcccatc
cccgccagcgcctgggagtccctcatcctgccctcgcgggtgcgcgactacgccccgggc
atgctcgacgagctgaccgcgaccggtgagatcctctggtcgggtcacggatcgcttccc
ggacgcgacggctggatcgccctgcacgtcgccgacacggcgccgctgaccctgctcgcg
ccggacgacgacgcggagacgggcgaggcggatcccgacgccctcgccgagcgcatcgtg
gccgctctgaccagcggcggagcctacttcgcgtcgcagctgcgtcagctgacggatgcc
gagaacgagcagtccgtcatcgaggcgctctgggatctcacgtggcggggccgcgtgacc
aacgacacgttcgccccggtgcgcaccctcctcggcggcggctcgcaggcccaccgcacc
gcccgccgcacgccgcgcgcgcggctctatcgcggcatggcgctcccccgccccggcgcc
accccgccgcgtccgcccgcgctcggcggccggtggtcgctgctgcccgaggccgagccg
gatgcctcggcgcgtgcgaccgccaccgcgagcctgctgctggaccggtacggcgtcgtc
acccgcggcagcgtgcaggccgaaggggtgcccggcggcttcgcgcagacctaccgggtg
ctggcgggcttcgaagaggcgggccactgccgccgcggctacgtcatcgagaagctcggc
gcggcccagttcgccgcctcggcgaccgtcgaccgcctgcgggagttcgccggcctctcc
gatcccgcgccgctgaaggccgtgaccctggccgccaccgaccccgccaacccctacggc
gcggcactggcgtggccgccgctggacggcgtcacccaccggcccggccgcaaggcgggg
ggcctcgtcgtgctcgtcgacggggcgctcacgctgtacctcgagcgcggcggccgctcg
gcgctggccttcaccgacgacgaggcgcagctcgccgccgccgccgcccacctcgccgag
acatcgcgcacgcgacggctggacaccctcacgatcgagcaggtgaacggcgagttcgtc
tacggcaccgccgtcggccgtgcgctgcggtccgccggcttcgtcgaggcgacccgcgga
ctcaccctgcgcaaggtcaccgcgggcacggcgctgcgccagccgcaggccaccgcgcac
accggggccgcggatgcctga

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