Microbacterium jiangjiandongii: QNO14_03000
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Entry
QNO14_03000 CDS
T11126
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mji Microbacterium jiangjiandongii
Pathway
mji03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNO14_03000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mji03400
]
QNO14_03000
Enzymes [BR:
mji01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QNO14_03000
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QNO14_03000
DNA repair and recombination proteins [BR:
mji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QNO14_03000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7573
TniQ
Cys_rich_KTR
Motif
Other DBs
NCBI-ProteinID:
WIM26038
LinkDB
All DBs
Position
complement(684710..685585)
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AA seq
291 aa
AA seq
DB search
MPEMPEVQGLVDFLGERARGLRVSRATVANIAALKTYDPPVDALTEAEITAAERHGKFVD
LAARTPTGDTLHLVFHLAKAGWLRWYDRLPATVIKPGRTPIALRIAFDDGAGFDLTEAGT
KKSLAVYVVRAPADVPGIARLGPDPLDPGFDRDTLAGLLAGRRTQIKGVLRDQSVIAGVG
NAYSDEILHAARMSPYALAAGLDDAEIDRLYAALRETITDAVAAASGKPPADLKDAKRRG
MQVHGRRGETCPVCGDEVRSVFFADNSLEYCPTCQTGGKILADRRLSRLLK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatgccagaagtgcaggggctcgtcgacttcctcggcgagcgcgcacgcggc
ctgcgcgtgtcccgcgcgacggtcgcgaacatcgccgcactgaagacgtacgaccctccg
gtcgacgcgctgaccgaggcggagatcaccgccgccgagcgccatgggaagttcgtcgac
ctcgccgcgcgcaccccgaccggcgacacgctgcacctcgtgttccacctcgccaaggcg
gggtggctgcgctggtacgaccggctcccggcgaccgtcatcaagccgggtcgcaccccg
atcgccctgcgcatcgccttcgacgacggagcgggcttcgacctcaccgaggccggcacc
aagaagtccctcgccgtctacgtcgtccgggctcccgccgacgttcccggcatcgcgcgc
ctcggccccgatccgctcgacccgggcttcgaccgcgacacgctcgcgggactgctcgcc
ggccggcgcacgcagatcaagggggtgctgcgcgaccagtccgtcatcgccggggtcggg
aacgcctactccgacgagatcctccacgccgcgcgcatgtctccgtacgccctcgcggcg
ggtctcgacgacgccgagatcgaccggctctatgcggccctccgggagaccatcacggat
gccgtcgccgcggcatccggaaagccccccgccgatctgaaggatgccaagcgccgcggc
atgcaggtgcacggccggcgcggtgagacctgcccggtctgcggcgacgaggtgcgctcg
gtgttcttcgccgacaattcgctggagtactgcccgacctgccagaccggcggcaagatc
ctggccgaccgccggttgtcccggctgctgaagtag
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