KEGG   Microbacterium jiangjiandongii: QNO14_03000
Entry
QNO14_03000       CDS       T11126                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mji  Microbacterium jiangjiandongii
Pathway
mji03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mji00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    QNO14_03000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mji03400]
    QNO14_03000
Enzymes [BR:mji01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     QNO14_03000
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     QNO14_03000
DNA repair and recombination proteins [BR:mji03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     QNO14_03000
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Zn_ribbon_TFIIB Ribosomal_S13 NFACT_N DUF7573 TniQ Cys_rich_KTR
Other DBs
NCBI-ProteinID: WIM26038
LinkDB
Position
complement(684710..685585)
AA seq 291 aa
MPEMPEVQGLVDFLGERARGLRVSRATVANIAALKTYDPPVDALTEAEITAAERHGKFVD
LAARTPTGDTLHLVFHLAKAGWLRWYDRLPATVIKPGRTPIALRIAFDDGAGFDLTEAGT
KKSLAVYVVRAPADVPGIARLGPDPLDPGFDRDTLAGLLAGRRTQIKGVLRDQSVIAGVG
NAYSDEILHAARMSPYALAAGLDDAEIDRLYAALRETITDAVAAASGKPPADLKDAKRRG
MQVHGRRGETCPVCGDEVRSVFFADNSLEYCPTCQTGGKILADRRLSRLLK
NT seq 876 nt   +upstreamnt  +downstreamnt
atgcccgagatgccagaagtgcaggggctcgtcgacttcctcggcgagcgcgcacgcggc
ctgcgcgtgtcccgcgcgacggtcgcgaacatcgccgcactgaagacgtacgaccctccg
gtcgacgcgctgaccgaggcggagatcaccgccgccgagcgccatgggaagttcgtcgac
ctcgccgcgcgcaccccgaccggcgacacgctgcacctcgtgttccacctcgccaaggcg
gggtggctgcgctggtacgaccggctcccggcgaccgtcatcaagccgggtcgcaccccg
atcgccctgcgcatcgccttcgacgacggagcgggcttcgacctcaccgaggccggcacc
aagaagtccctcgccgtctacgtcgtccgggctcccgccgacgttcccggcatcgcgcgc
ctcggccccgatccgctcgacccgggcttcgaccgcgacacgctcgcgggactgctcgcc
ggccggcgcacgcagatcaagggggtgctgcgcgaccagtccgtcatcgccggggtcggg
aacgcctactccgacgagatcctccacgccgcgcgcatgtctccgtacgccctcgcggcg
ggtctcgacgacgccgagatcgaccggctctatgcggccctccgggagaccatcacggat
gccgtcgccgcggcatccggaaagccccccgccgatctgaaggatgccaagcgccgcggc
atgcaggtgcacggccggcgcggtgagacctgcccggtctgcggcgacgaggtgcgctcg
gtgttcttcgccgacaattcgctggagtactgcccgacctgccagaccggcggcaagatc
ctggccgaccgccggttgtcccggctgctgaagtag

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