Microbacterium jiangjiandongii: QNO14_03855
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Entry
QNO14_03855 CDS
T11126
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mji Microbacterium jiangjiandongii
Pathway
mji03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mji00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNO14_03855 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mji03021
]
QNO14_03855 (rho)
03019 Messenger RNA biogenesis [BR:
mji03019
]
QNO14_03855 (rho)
Transcription machinery [BR:
mji03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QNO14_03855 (rho)
Messenger RNA biogenesis [BR:
mji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QNO14_03855 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
AAA_22
Mor
Motif
Other DBs
NCBI-ProteinID:
WIM26200
LinkDB
All DBs
Position
871618..873777
Genome browser
AA seq
719 aa
AA seq
DB search
MESISEIRTDGDTEGDNTPVDETVTTAPEEGAPTADGEAAAEPVEPDEAAAQTPAETETA
DVLESVAAVENGATEAPADAAPVDEKPAKAPRKRAPRRAKSSDVAEKAAEPAADAAVEAP
AASDAAQAAPAAASDDAAAETVAEPVAETAEAPAAKSTGRKTGSRRASSRTAGKASEAVA
DAPAEAAQTDEARTDVAASEGDAAPAADKRADKRDAKRDADKGDDDRADAGSRADADQNS
EGDKPSDGEQSEGETPSRSRSRSRNRNRNRNKDASGGQNGQGGNAPEPAEKAQPAESDDE
SGQGGRGRQRNKRRPQGGQSDEFDTEIGEDDVLIPIAGILDVLDNYAFVRTTGYLPGTSD
VYVSLGQVKKYHLRKGDAVVGAIKQPRENEQSGRQKYNALVKVDSINGLSVDDAAERVEF
GKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIA
TNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVEL
GRDVVVLLDSITRLGRAYNISAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTIL
ATALVETGSKMDDVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSPDE
VKITWKLRRALAGLDPQQALEVVLGKLRETQSNVEFLVQMQKSMPAPGGSSHANDNSIR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgagatccgtaccgacggcgacaccgagggcgacaacacgcccgtg
gacgagaccgtcaccaccgcacctgaagagggcgcaccgacggccgacggcgaggctgcc
gcagagccggtggagcccgacgaggccgccgcccagacgcctgccgagaccgagaccgct
gacgtgctcgagtccgtcgcagccgtcgagaacggcgcgaccgaggctccggccgacgcg
gcacccgtggacgagaagccggcgaaggcgccgcgcaagcgtgctccgcgtcgtgccaag
agcagcgacgtggctgagaaggccgcagagccggccgccgacgccgcggtcgaggctccg
gccgcaagcgacgccgcgcaggccgcgcccgccgcggcatccgacgatgccgccgccgag
acggtcgccgagccggtcgccgagacagccgaggcgcccgccgccaagagcacgggtcgc
aagaccggctcgcgtcgggccagcagccgcaccgccggcaaggcttccgaagctgtcgcc
gacgcgccggcagaggcagcgcagaccgacgaggcccgcaccgacgtcgccgcctccgag
ggcgacgccgcacccgccgccgacaagcgcgccgacaagcgcgacgccaagcgcgacgcc
gacaagggtgacgacgaccgcgccgacgcgggcagccgcgccgacgccgaccagaactcc
gaaggcgacaagccctccgacggggagcagtccgagggcgagacgccgtcgcgttcgcgc
agccgttcgcgcaaccgcaaccgcaaccgcaacaaggacgcctcgggcggccagaacggt
cagggcggcaacgcgccggagccggccgagaaggcccagcccgccgagtccgacgacgag
tcgggtcagggtggccgcggtcgccagcgcaacaagcgccgcccgcagggcggtcagagc
gacgagttcgacaccgagatcggcgaggacgacgttctcatccccatcgccggcatcctc
gacgtgctcgacaactacgcgttcgtgcgcaccaccggctacctgccgggcacgagcgac
gtctacgtctcgctcggtcaggtgaagaagtaccacctgcgcaagggcgacgccgtcgtg
ggtgcaatcaagcagccccgcgagaacgagcagtccggtcgccagaagtacaacgcgctg
gtcaaggtcgactcgatcaacggcctgtccgtcgacgacgccgccgagcgcgtggagttc
ggcaagctgaccccgctgtacccgcaggagcgtctgcgcctcgagaccgcccccgagaag
ctgacccagcggatcatcgacctggtggcgccgatcggcaagggccagcgcggcctcatc
gtcgcgcccccgaaggccggcaagaccatcgtgctgcagcagatcgccaacgcgatcgcg
acgaacaaccccgaggtgcacctcatggtcgtgctcgtggacgagcggcccgaagaggtc
accgacatgcagcgcaccgtcaagggcgaggtcatcgcctcgaccttcgaccgtcccgcc
gaggaccacaccacggtcgccgagctcgccatcgagcgcgccaagcgcctggtggagctc
ggtcgcgacgtggtcgtgctgctggactcgatcacgcgtctgggtcgtgcgtacaacatc
tcggctccgacctccgggcgtgtgctgaccggtggcgtcgacgcctcggcgctgtacccg
cccaagcgcttcttcggcgccgcgcgcaacatcgagaacggcggatcgctcacgatcctc
gcgacggccctggtggagaccgggtcgaagatggacgacgtcatcttcgaggagttcaag
ggcaccggcaacagcgagctgcgcctgagccgtcagctcgccgacaagcgcatcttcccg
gctgtcgacgtcaacgcctcgagcacgcgtcgcgaggagatgctgctgtcgcccgacgag
gtcaagatcacgtggaagctgcgccgcgccctcgccgggctcgacccgcagcaggcactg
gaagtggttctcggaaagctgcgcgagacgcagtcgaacgtcgagttcctcgtgcagatg
cagaagtccatgcccgcccccggcggcagcagccacgcgaacgacaacagcatccgctga
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