Mucilaginibacter jinjuensis: PQO05_08160
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Entry
PQO05_08160 CDS
T08815
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mjj
Mucilaginibacter jinjuensis
Brite
KEGG Orthology (KO) [BR:
mjj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjj03032
]
PQO05_08160 (gyrB)
03400 DNA repair and recombination proteins [BR:
mjj03400
]
PQO05_08160 (gyrB)
Enzymes [BR:
mjj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PQO05_08160 (gyrB)
DNA replication proteins [BR:
mjj03032
]
Prokaryotic type
DNA Topoisomerases
PQO05_08160 (gyrB)
DNA repair and recombination proteins [BR:
mjj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PQO05_08160 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
WCT13905
LinkDB
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Position
complement(1803739..1805697)
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AA seq
652 aa
AA seq
DB search
MSEENQDRSNYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEAMAGY
CDTINVTIHPGNSISVKDNGRGIPTAMHTKEKKSALEVVMTILHAGGKFDKDTYKVSGGL
HGVGVSCVNALSIHLKTNVYREGKIFQQEYEKGKPMYDVKVVGETDRTGTTQWFQPDGEI
FTTTLEYKYDTLASRLRELSFLNKGIRLTLTDEREALEDGSFRTEEFFSEGGLKEFVKFL
DGTRTPIIPEPIYVEGNKQGIPVELALQYNDTYSENVHSYVNNINTIEGGTHVAGFRMGL
TRTLKAYADKSGLLKNLKVDITGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVSGAV
NVAVGEILSIYLEENPKEARLIVNKVILAATARAAARKAREMVQRKSVMSGSGLPGKLSD
CANSDPALCELFLVEGDSAGGTAKQGRNREYQAILPLRGKILNVEKAMEHKIYENEEIKN
MFTGLGVSIGTPEDDKALNLAKLRYHKIVIMTDADVDGSHITTLILTFFFRYMKELVEFG
YVYIATPPLYQVKKGKEFEYCWTDEQRDAAIQRLKGAGKEDSVHTQRYKGLGEMNAEQLW
ETTMDPARRTLRQVSIENAAECDHTFSMLMGDEVAPRREFIEKNAKYARIDV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaatcaggacagatccaattattcagcagacaatatacaggttttagaa
ggtttagaggcggttcgtaaaagaccgtcgatgtacattggcgataccggcgttaaaggt
ttacaccacttagtttatgaggttgttgataactcgatagatgaggctatggccggctat
tgcgatacaatcaacgtaaccatccatccgggaaattctatatctgtaaaagataatggc
cgtggtatccctaccgccatgcacactaaagaaaagaaatcggcattagaggttgtaatg
accatcttacacgccggtggtaaatttgataaagacacttacaaagtatcgggcggttta
cacggtgtgggggtaagttgcgttaacgcactttcaatccacctaaaaactaacgtttac
cgcgaaggcaagatatttcaacaagagtacgaaaagggtaaaccaatgtacgatgtgaag
gtagttggcgaaaccgaccgtaccggaacaacacaatggtttcaacctgatggcgaaatt
ttcaccaccacccttgagtataaatacgatacccttgcttcacgtttacgcgaactttca
ttccttaataaaggaatacgtttaacgttaacagatgagcgcgaagctttggaagatggc
tctttccgcaccgaagagttcttctctgaaggcgggctaaaagaattcgttaaattttta
gatggtacccgtacccctatcatccccgagccaatttatgtagaaggtaacaagcaaggc
atcccggttgagttggctttgcagtacaatgacacctactctgaaaacgtacactcatac
gtaaacaatattaacaccatcgaaggcggtacacacgtagctggtttccgtatgggctta
acccgtactttgaaagcttatgccgacaagtcgggcttattgaaaaacttaaaggtagat
attaccggtgatgacttccgtgaggggttaaccgctgttatctcagtaaaagtagccgag
cctcagtttgaaggccaaaccaaaaccaagctgggtaataacgaggtgagcggtgcagta
aacgttgctgtgggcgaaattttatctatctatttagaggaaaacccgaaagaagcacgc
ctgatcgtaaacaaggtaatattggccgctactgcacgtgcagcagcccgtaaagcccgc
gaaatggtacaacgtaaaagcgtaatgagcggttctggcttgcctggtaaactatcagat
tgcgccaatagcgatccggcattatgcgagttgtttttagttgagggtgactcggcaggt
ggtactgcaaaacaaggccgtaaccgcgagtatcaggccattttgccactgcgtggtaaa
atcctgaacgtggagaaagcgatggagcataagatctatgagaacgaagagatcaagaac
atgtttaccggtttaggtgtaagcatcggtacgccagaggatgacaaagcgcttaactta
gctaagttacgctaccacaaaattgtgatcatgacggatgccgacgttgacggttcgcac
attactacgctgatcttaaccttcttcttccgttatatgaaagagctggttgagtttggt
tatgtatacattgcaaccccaccgctttaccaggttaaaaaaggtaaagagtttgaatac
tgctggacagacgagcaacgcgatgctgctatacaacgccttaaaggtgcaggtaaagaa
gatagcgtacatacccagcgttataaaggtttaggtgagatgaacgccgagcagctttgg
gaaactactatggaccctgcgcgccgtaccctgcgccaggtaagtattgaaaacgctgca
gagtgtgatcataccttctctatgctgatgggtgatgaagttgcccctcgccgcgagttt
attgagaaaaatgccaaatacgcccgtatcgacgtataa
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