Mucilaginibacter jinjuensis: PQO05_16360
Help
Entry
PQO05_16360 CDS
T08815
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mjj
Mucilaginibacter jinjuensis
Pathway
mjj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQO05_16360 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjj03019
]
PQO05_16360 (pnp)
03016 Transfer RNA biogenesis [BR:
mjj03016
]
PQO05_16360 (pnp)
Enzymes [BR:
mjj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PQO05_16360 (pnp)
Messenger RNA biogenesis [BR:
mjj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PQO05_16360 (pnp)
Transfer RNA biogenesis [BR:
mjj03016
]
Prokaryotic type
tRNA degradation factors
PQO05_16360 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WCT10310
LinkDB
All DBs
Position
complement(3653530..3655668)
Genome browser
AA seq
712 aa
AA seq
DB search
MSYNVIRKTIDLGDGRTIEIETGKLAKQADGSVVVKMGDTMLLATVVSSKEAKEGVDFLP
LSVDYQEKYAATGRIPGGFLRREARLSDYEVLISRLVDRALRPMFPEDYHADTQVMISLI
SADKDIMPDALAGLAASAALSVSDIPFNGPISEVRVAKIDGQLVINPTLSQLEHATLEFI
VAGSEHDINMVEGESKEIQEAELVEAIKFAHTAIKLQCLAQKELTIEVGKTEKRVYSHEH
SNEDLKKAIYAATYDQVYAIASSASGKDERGAKFKEVRDTYIATLGEIDDVTKFLAKKYY
HDVEYDAIRNLVLDEGKRLDGRKTTEIRPIWSEVSYLPAAHGSAVFTRGETQSLTTVTLG
AKDDEQMIDGAFINGYQKFILHYNFPGFSTGEVRPNRGAGRREIGHGNLAMRSLKRVLPD
ADENPYTIRVVSDILESNGSSSMATVCAGTLALMDAGVKITNPVSGIAMGLITNEMGTKY
AILSDILGDEDHLGDMDFKVTGTKNGIVACQMDLKINGLSYEVLTNALDQAKEGRLHILG
EMAKTLSAPREDYKPFAPRIVTIKIDKEFIGAVIGPGGKIIQEMQRETGATISIEEKDNQ
GIVQIFADDKASIDAAVSRIRAIASKPEVGEVYEGKVRSIMPFGAFVEIMPGKDGLLHIS
EIDHKRIETMDGVFEVGEMVKVKLIDIDKQGKLKLSRKVLLPKPERNTEPKA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagttacaacgtaattagaaaaaccatcgatttaggtgacggccgcaccattgagatc
gaaaccggtaaactggccaaacaagcagatggctctgtagtggttaaaatgggtgatacc
atgttattggctactgtagtttcatcaaaagaagcgaaagagggtgtagactttttgcca
ctttctgttgactaccaagaaaaatatgctgctacgggacgtatccctggtggtttttta
cgccgtgaggcgcgtttatcagactatgaggttttaatctctcgtttggttgaccgtgca
ttacgcccaatgttccctgaagattatcacgctgatacccaagtgatgatctctctgatc
tctgctgataaagatattatgcctgatgcactagccggtttggcagcatctgcagcttta
tctgtttctgatatccctttcaacggaccaatttctgaggttcgtgttgctaaaattgat
ggccagctggttatcaacccaaccctaagccaactggagcatgctactttagagtttatc
gtagctggttctgagcatgacattaacatggttgagggcgaatcgaaagaaattcaggaa
gctgaattagttgaggctatcaaatttgcacacactgctattaaattacagtgtttagct
caaaaagaattaaccattgaagttggtaaaaccgaaaaacgcgtttacagccacgaacac
agcaacgaggatttgaaaaaagcaatctacgctgcaacttacgatcaggtttatgctatc
gcttcttctgcttccggcaaagacgagcgtggtgctaaatttaaagaagtacgtgatact
tatatcgctactttaggcgagattgatgatgttaccaaattcttagctaaaaaatattac
cacgatgttgagtacgatgctatccgtaatctggtattagacgaaggtaaacgtttagat
ggccgtaaaactaccgagatccgcccaatctggagcgaagtaagttacttgcctgctgct
cacggttctgccgtatttacccgtggcgaaactcaatcattaaccactgttactttaggt
gctaaggatgatgagcaaatgattgatggtgcgtttattaacggctaccagaaattcatt
ttacactataacttcccaggcttctcaactggtgaggttcgccctaaccgtggtgctggc
cgtcgcgaaattggtcacggtaacctggctatgcgttcattaaaacgcgtattgcctgat
gctgatgagaatccatatactatccgcgtagtttctgatatactggagtcaaacggttcg
tcgtcaatggcaacagtttgtgcaggtaccttggctttgatggatgctggtgttaaaatt
actaacccggtatctggtattgcaatgggattgatcactaacgaaatgggtactaaatat
gctatcctttctgatatcttaggtgatgaagatcacttaggtgatatggactttaaagta
acgggtactaaaaacggtatcgttgcttgccagatggacttaaaaatcaatggcttatct
tatgaagtattaaccaacgctttagatcaggctaaagaaggccgtttacatatcttaggc
gaaatggctaagactttaagcgcacctcgtgaagattacaaaccgtttgctccgcgtatc
gttaccattaaaatcgataaagaatttattggtgcagttatcggtcccggtggtaaaatt
atccaggaaatgcaacgcgaaaccggtgctactatatctatcgaagagaaagataaccag
ggtatcgtacaaatatttgcagacgacaaagcatctatcgatgcagccgtttcacgtatc
cgcgctatcgcttctaaaccagaagttggtgaagtttacgaaggcaaagtaagatcaatt
atgcctttcggtgcatttgttgagattatgccaggtaaagatggtttattacacatttca
gaaatcgatcacaaacgtatcgaaactatggatggcgtatttgaagtaggcgagatggtt
aaagtaaaactgatcgacatcgataaacaaggtaaacttaagttatcgcgcaaagtttta
ttgccaaagccagaacgtaataccgagcccaaagcttaa
DBGET
integrated database retrieval system
