KEGG   Mucilaginibacter jinjuensis: PQO05_18835
Entry
PQO05_18835       CDS       T08815                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mjj  Mucilaginibacter jinjuensis
Brite
KEGG Orthology (KO) [BR:mjj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mjj03032]
    PQO05_18835
   03400 DNA repair and recombination proteins [BR:mjj03400]
    PQO05_18835
Enzymes [BR:mjj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     PQO05_18835
DNA replication proteins [BR:mjj03032]
 Prokaryotic type
  DNA Topoisomerases
   PQO05_18835
DNA repair and recombination proteins [BR:mjj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PQO05_18835
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: WCT10796
LinkDB
Position
complement(4358752..4359837)
AA seq 361 aa
MNRLVKKLEKIGRDPKITARAIGLRYVSDSTPGYTRKKSGKGFSFYDSEGKLVKDKELVQ
RFTKMVIPPAYTNVWISPFENSHLQFTGVDAAGRKQYRYHAGWNQIRNQSKYHRLQAFAA
HLPAIREHVDKDLTRRNLDHDKVVALIVRLMELTSIRVGNESYKKLYGSFGLTTLQDRHV
KIDGSDMKFEFKGKKGVFHKIDLHSKKLARLVKQCRDIPGKELFQYYNEDGSRCSVGSGD
VNTYLKNITGEDFTAKDFRTWAGSVSSLYAFKEAGEFNNQSECRKKIISVLDEVALNLGN
TRTVCKKYYVHPTIIKSYEAGTLFKYIDDLDENKDTKASELNNAEKALLHILEHEKLAEA
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaaccgcctcgtaaaaaaacttgaaaaaattggccgcgatcctaagatcaccgccaga
gctatcggcttgcgttatgtatccgacagcacacccggatatacccgcaaaaaatcgggt
aaaggtttcagtttttatgattcggagggtaaactggtaaaagataaagaactggtgcag
cgtttcaccaaaatggtgatcccgcctgcttataccaatgtatggatctcgccgttcgaa
aacagtcatctacagtttacaggtgttgatgccgcggggcgcaagcaataccgttaccat
gccggttggaaccagatccgtaaccagtctaagtatcatcgcttacaagcctttgctgca
catttaccagccattcgtgagcatgtggataaagatttgacacgccgtaacctcgatcat
gataaagtggtagcgctgattgtaaggttgatggaattaaccagtatccgcgtaggtaat
gaatcatataaaaagctttatggttcgttcggcttaacaacattgcaagacaggcatgtg
aaaattgacggttcggatatgaagtttgaattcaaaggcaaaaaaggtgtgtttcacaaa
atagacctgcacagtaaaaagctagcccgcttggttaagcaatgccgcgatatacctggt
aaagaactttttcaatattataatgaggatggcagccgctgttcggtaggctcgggcgat
gtaaatacttaccttaaaaatatcacaggggaagactttactgctaaagatttccgtacc
tgggcgggtagtgtgagcagcttatatgcctttaaagaagccggtgagtttaataaccag
tcggagtgccggaaaaagatcatcagtgtactggatgaggtagcactaaacctcggcaac
acccgtaccgtttgtaaaaagtactacgtgcacccaaccattataaaaagctatgaggcg
ggtacactgtttaaatacatcgatgatctggatgagaataaagacactaaagcatcagaa
ttaaacaatgctgagaaagccctgctccacattttagaacacgaaaagctggccgaagcc
agctaa

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