KEGG   Mucilaginibacter jinjuensis: PQO05_25170
Entry
PQO05_25170       CDS       T08815                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mjj  Mucilaginibacter jinjuensis
Brite
KEGG Orthology (KO) [BR:mjj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mjj03400]
    PQO05_25170
Enzymes [BR:mjj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PQO05_25170
    5.6.2.6  RNA 3'-5' helicase
     PQO05_25170
DNA repair and recombination proteins [BR:mjj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PQO05_25170
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII FlgM
Other DBs
NCBI-ProteinID: WCT12028
LinkDB
Position
complement(5813345..5815948)
AA seq 867 aa
MDKGQQVIKEWFKYKKWKQFPFQLEMMDAYLSGYSGLLNAPTGSGKTFALFLPFLAGYIN
KYPDTYQKQTSNGLRMLWITPLRALTNDIRKAMQEVCDDLDIPWTIATRTGDTPAAEKQA
LKRKLPEVLLTTPESLHLMLAQKEYPKMFQNLEVVVIDEWHELLGTKRGVQVELGLSKLR
VLSSELRIENDGANYSPLTTHHSLLKLWGISATIGNLEQAAEVLLGNNFPTDRIKMVRAN
VDKKIVIKSVIPQSVENYSWTGHIGLALLPEVMKIVAKSNTTLIFTNTRAQSEIWYHAIL
DNYPEYAGIMAMHHGSLDNELRNWVEQALHNEALKLVVCTSSLDLGVDFRPVDTVIQVGS
PKGVARFMQRAGRSGHHPGATSKIWFIPTHSMELLEGAALKQAMINGNYESRDPVLLAMD
VLIQYMVTLAVSDGFRAEELFNEVKSTYAFADIRRTEFNQLLDFITTGGATLSQYDEFLK
VEIENGLYKVNNRRVAMRHRLSIGTITSEVSLRVKLLHGGGLGSIEEYFISRLKSGDTFW
FAGRSLEFIRVKEMTAYVKKSNAKKGLIPSWLGGRMPLSSQLAAVFRDKLDEVARGIEQD
EEVIALKPLFNLQSKLSHLPQSHEFLIESFRSRDGHHLLFYPFEGRLVHEGMASLIAFRL
SKLKNATFSIAMNDYGFELLTDDDVLLKQALEQDLFSINNLLDDIQHSLNANEMARRRFR
DIAHIGGLVFTGYPGQPVKNRHLQASTSLLFEVFSEYEPDNLLVRQAYNEALAFQLEEFR
LREALQRISKQQVIIKEIDRPTPFAFPIMVDSLREKLTTESLEERVSKMARDYDVEVKTK
KQAQEDAPAEPKRQSFFIGYPGRGKKK
NT seq 2604 nt   +upstreamnt  +downstreamnt
atggataaaggtcagcaggtaataaaagaatggtttaagtacaaaaagtggaagcagttc
ccgtttcagctcgaaatgatggatgcttacctctccggctattcgggcctgctgaatgca
cctacgggtagcggtaaaacatttgcgctgtttctgcctttcctggccgggtatattaat
aaatatcccgatacctatcaaaagcaaaccagcaatggcctgcgcatgctctggattacg
ccattacgagccttaaccaacgatattcgcaaagccatgcaagaggtatgcgacgacctc
gacatcccctggactattgccacccgaacaggagacacccccgccgccgagaagcaagcc
cttaaacgtaaactccccgaagtactactcaccactcccgaaagcctgcacctgatgctg
gcccaaaaggaatatcccaagatgttccaaaacttagaagtggtagtgattgatgagtgg
catgagttgttgggcacgaagcggggagtacaggtggagctgggattatctaagttgcga
gtattgagtagcgagttgcgaattgaaaatgacggagcaaactactcaccactcactact
caccactcactactaaagttgtggggcatcagcgcaaccatcggtaaccttgaacaagcg
gccgaagttcttctcggtaataatttccctacggatcgcattaaaatggttcgtgccaat
gtggataagaagattgtgattaaatcggtgattccgcaaagcgtggagaactattcgtgg
acggggcatattggtttggctttattgcccgaggtgatgaagattgtggctaagagtaat
accacgctgatatttaccaatacaagggcacagtcggagatttggtatcatgccatttta
gataactaccctgagtatgctggtataatggctatgcatcatggttcgttggataatgaa
ctgcggaattgggtagaacaggctttacataatgaggcattaaaactggtggtttgtacc
tcgagtttagatctgggtgtcgattttcgcccggtagatacggtgattcaggtgggtagc
cccaagggtgttgcccggtttatgcagcgtgcaggtaggagtggtcaccatcctggagcg
acatccaagatctggtttatccccacgcactccatggaattactggaaggtgcggccctt
aaacaagccatgatcaacggcaattacgaaagccgtgacccggttctgctggctatggat
gtgttgatccagtacatggttacgctggccgtgtcggatgggtttcgggctgaagaattg
tttaacgaagtgaaatctacctatgcctttgcagatattcgccggactgagtttaaccag
ttgctcgattttattacaaccggcggcgctacgctttcgcaatacgacgagtttttaaaa
gtagaaattgagaacggtttatataaagtaaacaaccgccgtgtagccatgcgccaccgg
ctaagtatcggtactattaccagcgaggtaagtttgcgggttaagttactgcatggtggc
ggactgggttctatcgaagaatattttatatcccgcctaaaatcgggagatactttttgg
tttgccggccgcagcctggaatttataagggtgaaggaaatgacggcctatgtcaaaaaa
tccaacgctaaaaaaggcttgatcccaagctggttgggtgggcggatgccgctttcatcg
caactggcagctgtgttccgcgataaactggatgaagtagcgagaggtattgagcaggat
gaggaggtgattgcgcttaaaccacttttcaacctgcagtcaaagctttcacatttacca
caaagccatgagtttttaatcgaatcatttcgttcgagagatgggcaccatttgctgttt
tatccgttcgagggtaggttagtgcatgaggggatggcttcgttgattgcgttccgccta
tctaaattgaaaaatgccaccttctctatcgccatgaatgattatggctttgagctgctg
accgatgatgatgtattgttaaaacaagcgcttgaacaagatttgttttcgatcaataac
ctattggatgatattcagcatagcttaaatgctaatgaaatggcacgccgtagattcagg
gatattgcacatattggcgggttggtatttacagggtaccccggtcagccggttaagaac
aggcacttgcaggcatcaacctcgttgctgttcgaagtgtttagtgagtacgaaccagat
aacctgttggtacgccaggcatataatgaagcgttggcttttcagttagaggagtttcgt
ttgcgtgaggccttgcaacgcattagcaagcagcaggttattatcaaagaaattgatcgc
cctacaccatttgctttcccgataatggttgatagcctccgtgagaaactaaccaccgaa
agccttgaagaacgcgtaagcaaaatggcccgagattatgatgtggaagtgaaaaccaag
aaacaagcgcaagaggatgcaccagctgaacccaagcgacaaagcttttttattgggtat
ccgggtagagggaagaagaagtaa

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