Candidatus Methanospirare jalkutatii: N2V74_00855
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Entry
N2V74_00855 CDS
T09964
Name
(GenBank) PKD domain-containing protein
Organism
mjk
Candidatus Methanospirare jalkutatii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Big_13
Glucodextran_B
Big_7
Y_Y_Y
K319L-like_PKD
Big_3_3
EF-hand_7
TTR-52
Big_5
FlgD_ig
SdrD_B
Sde0182_C
Bact_surface_Ig-like
Motif
Other DBs
NCBI-ProteinID:
UYZ40278
LinkDB
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Position
159813..165407
Genome browser
AA seq
1864 aa
AA seq
DB search
MNKIWKIRCLVAGLIVLLVGVGIATIALYGPQKTPLEQDIAMESMEYPRFFKEFNLSIKG
KPLLYRPVELICRVTQTPYASGNISIEVILPEGFELISGNLSWHGYLAANKTIEVKSIIR
AIKVGNWTITAKTRPFQATNLYVHVGKKSSIVYKTFPGPAFFGFPASAGLKRIHPQKELL
LNITTENESGGSTDNPLTFIEKTIINATKMKKTIQTGNASAINMSEYSENVQAQYESLGA
TKRHKEVIFAEELPAKVMNISSKEEEVLKRRNVANITSGSASAWIYDMYVTSVSDSDGDG
YYEEFYLYIDADTWEDSMDVYVEIYSSTGDAWYTNPWTIHGLEIDPVYIPFWMSDFTTGD
WGGDNIQPTTVTLTVDLYEYYSGTYQDTDTEDVPIETPTIDYWYITPTSVNPGGCFTAYY
KITNPSSNSYDAWLGLSIRDPNDNVINDPDNDKEVTLQPGTHWYSREFTVPSDATTGLYD
IALGLHGGRIGNSVAWYYTGWQNDELEVIQEEEKYYLKVINNDPDSFYVYFDMDDNHDWN
PDEYPYYLSVDGYSTAYSANIEAATGWHTVYIMWFDCDYCEWQHQELLLYIDDGETQEYA
FTLPWCENIIESVSFDPDPPITVVPGAEINIDVIVSLTTCRDGVLQVWIYDADLNIDKKD
WVYIPYSQSTTRTLNLDFDAPITSGTYECEVYTQFVPGATSGPIDYCSICEVNQIDSYTI
NVELLRYSVKGYFVYTDDHGEERPVRYARVELYDNEPYPLPPELLQTTHTDANGYYEFDP
IDNNDGFLEGGRDIFVVVYADTDAVRVTDGSSVYSHPTEIVDNVGPDDITGGYLDMGKIN
VDNDGAFNIYNTTIDEYQWLNERVDWTREQIEVRWPYGGWPQHVYIYNTLTGAIIEEWIE
VPNGWEWDRHTPLHEYAHGIMLAAYGYNHFNMPPAGNYNGHWIYMESDPGFAFIEGWAEF
MECAIDNDKDYSFNTSETIESNDWADYESFGNWDGSIVEGAVASILWDIFDPSDPNDNCE
DGFFDDGISLGDGISNEFNKLWEIILKDNPKDIDDFWNHWFSTSDETPTNFGQKYELKAI
YFEHRIDKNSKPVCSISQPADWISGTYTIPATASDTDPEDPLKVSFYYSTKSSEGPWNYI
GSDSTPSGNEYSVAWDTDNILDDQVWLKAVASDGMESCESISSAFGVDNAKPDSEIVYPE
DGKAYNKSTIKTHFWANDVTVGREWSGVAYLYYKMDTDPWKKISYSGGAVNVNYTLSDGR
HTFYVKAEDKAGNVEESESVTFIIDTTPPTISIISPTDGQVFTTATITVSGTVSDNIDLS
KVEVKVGSGSWQTATISGTTWSKQVTLAPGPNTIYARAIDEAGNTNEISVTVTYNRPPNR
PSNPSPSDGATNVPIDTSLSWSCSDPDGDTLKYDIYLGTSIPPPLVKSDHTSTTYDPILE
NNTTYYWKVVAKDGYAETEGDIWSFTTVSPDTTPPETEIIEGPSGKINYSDVRFVWTGTD
DRTPTSELVYAYKLEGYDADWSWTSDTSKNYSLPNGNYTFKVKAKDKAGNVDPTPAERTF
TVSVENQPPVASFTYSPQHPKVNENITFNASLSYDPDGTIVEYEWDFGDGNITSTTEEII
KHFYSETGIYEVTLTVTDDEGATNSTTKEITVQPASEANISFNPSRSIIGVGLTAEINLI
LDKAQNGLSGYNITVSLSNATVAEITSVSFPDWATLHSNSTLPADSLWIKAVDLNDKIKS
GATNITLATITLRGDKQGISDILMTVTKMDDDNGNPIDLNAVSGKVEVIGVVPFPGCENP
PTDPDGDGLYEDINGNGRKGFNDVVVFFNYLKWVEENQPCIECFDFNKNGRIDFDDVVKL
FEEI
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatctggaagataagatgtttggttgctggtttgatagtattgctggttgga
gttggaatagcgactatagcattatatggcccacagaaaacacctttagaacaagacatc
gcaatggagtcaatggagtatccgagattctttaaggaatttaatttatctattaaagga
aaacccttgctataccggccagttgagctaatttgtcgcgtaacacaaacaccgtacgca
agtggaaatatttcgattgaagttatacttccagaaggctttgagcttattagtggtaat
ctttcgtggcatggatatttagctgcgaacaaaacaattgaagttaaaagtataataaga
gccattaaagtaggaaattggacaattactgcaaaaacacgaccatttcaggctactaac
ctttatgttcatgtgggaaaaaaatcatcaattgtatacaaaacatttccggggcctgca
ttttttggctttcccgcatctgctggcctaaaaagaatacatccacaaaaagaacttctt
ttaaatataacaaccgaaaatgagagcggtggcagcacagataatccactaacctttatt
gaaaaaaccatcataaacgcaacaaaaatgaaaaaaacaatccaaacgggcaacgctagt
gcaataaacatgagtgaatactctgaaaatgttcaagcgcaatatgaatcactaggagcg
accaaacgtcataaagaagtaatctttgcagaggaattgcctgctaaagttatgaatatc
tcgtcaaaggaggaagaagtattgaagagacgaaatgttgccaatatcacaagtggttct
gccagtgcttggatatatgatatgtatgtgacttctgtatcagacagtgacggagatggt
tactacgaggaattctacttatatattgatgctgatacatgggaagatagcatggacgtt
tatgtggaaatctactccagcactggtgatgcatggtacacaaatccttggacgatccat
ggattggagatcgacccggtttatatccctttttggatgagcgacttcacaactggtgat
tggggaggggacaacattcagccaactactgtaacgctcacagtagatttgtatgaatat
tattcaggcacctatcaagatactgacacagaagatgtgccaatagaaacgccaacgatt
gactattggtatataactccaaccagtgtaaacccaggagggtgttttacagcatactat
aagataacaaatccttcatctaatagttatgatgcgtggcttgggctcagtatacgagat
ccaaatgataatgtaataaacgaccccgacaatgataaagaggtaacattacaacctggg
actcactggtatagtagagagtttacagttccttctgatgcaactactggattatacgac
attgcactcggcttgcatggtggacggatagggaatagtgttgcgtggtattacactggt
tggcagaatgatgaacttgaggttatccaggaagaggaaaaatattatttaaaagtcatt
aacaatgaccctgactccttttatgtttactttgatatggatgacaatcatgactggaat
cctgatgagtatccatactacctatcggtcgatggttattccactgcctacagcgcgaat
atagaggctgctactggatggcatactgtttatataatgtggtttgattgtgattattgc
gaatggcaacatcaagaattactattgtatattgatgatggagagacgcaagaatacgct
tttacattaccttggtgtgagaatatcatcgaaagcgtatcctttgatccagaccctcca
ataacagttgttccaggtgcggaaataaacatcgatgtcatagtaagtctaactacttgt
agagatggtgttcttcaagtatggatatatgatgccgatcttaatatagataaaaaggat
tgggtatatatcccttactcacaatccacgacaagaacacttaacttggatttcgatgct
ccaataacatctggtacttatgagtgtgaagtgtatactcaatttgtaccaggagcaaca
tcaggcccaatagactactgtagcatatgtgaagtgaaccaaatagattcttatacaata
aatgttgagctccttagatattctgtaaagggatattttgtatatacagatgatcatggt
gaagaacgtccagtaagatatgcgagagtggaactttatgataacgaaccatatccattg
ccaccagaactcttacaaacgactcatacagatgctaatggatattacgaatttgatcca
atagataataatgatggatttctagagggcggacgtgatatctttgtggttgtttatgct
gatactgatgcggtaagagtcaccgatggaagtagtgtctattctcatccaactgaaata
gtagataatgtcggacctgatgacattacaggtggatatttagatatgggaaaaattaat
gtagataacgatggtgcttttaacatctataatacaacaatcgatgaatatcaatggctt
aatgaacgcgttgattggacaagagaacagatagaagttagatggccctatgggggctgg
ccacaacacgtatacatatacaacacattaactggtgcaatcatcgaagaatggatagaa
gtaccaaatggatgggaatgggatcgtcatacgccattgcatgaatatgcgcatggaata
atgttagctgcttacggatataaccatttcaatatgcctccagctggcaattataatggt
cattggatatatatggaatcggatcctggatttgctttcatagagggctgggcagaattt
atggaatgcgctattgataatgataaggattatagttttaacacttcagaaaccatagag
tcaaacgattgggcagattatgaatcttttggtaattgggatgggagtatagttgaaggt
gcggtagcaagtattttatgggatatatttgatccctctgatcctaatgataattgcgaa
gatggtttttttgatgatggaatatcactgggcgatggaatatctaacgaatttaacaag
ttatgggaaataattttaaaagataatccaaaagatatagatgatttctggaatcattgg
ttttctacatcagatgagacaccaacaaactttggtcaaaaatacgaactaaaagcaata
tacttcgaacatagaatagacaagaactccaaaccagtttgcagcatatctcaaccagct
gattggatttcaggaacatatacaattccagcaacagcatctgatacagatccagaggat
ccccttaaagttagcttttattactctactaagagtagtgagggtccatggaattatatt
ggttcagattcaactccgtcaggaaatgagtattctgtagcatgggatactgacaacata
cttgatgaccaagtttggcttaaggcagtagcttcagatggaatggaaagttgtgaaagt
atttcatcggcatttggagttgataatgcaaaaccagattctgaaatagtttatccagaa
gatggtaaagcatataacaaatcaactataaaaacacatttctgggcaaacgatgttact
gttggcagggagtggagtggtgttgcatatttatactacaaaatggataccgatccatgg
aaaaagatttcatatagcggaggtgctgtgaatgtcaattatactttgtctgatggccga
catacattttatgtcaaagctgaagacaaagctggaaatgtagaagaatctgagtcagtt
acatttattattgacacaacacctccaacgatttccatcatatctccaacggacgggcaa
gtgtttacaactgctaccattactgttagcggaactgtatcggataatattgatctgagc
aaagtagaagtgaaagtggggtctggaagttggcaaactgcaaccatatccggaactact
tggagtaagcaagtaacacttgctcctggaccaaatacaatttatgccagagcgattgat
gaagcaggaaataccaacgaaatatcggtaacagttacttacaatagaccaccaaatagg
ccaagcaatccctccccttcagatggtgcaacgaatgttccaattgatacaagtttgagc
tggtcgtgcagcgatcctgatggtgatactttaaagtatgacatctatttaggaacatcc
attcctccaccgcttgtcaagagcgaccatacaagcacaacatacgacccaattttagaa
aacaatacaacatactactggaaagtagttgcaaaggatggatatgcagagacagaagga
gacatctggagtttcacgactgtctcacctgacacaacaccaccggaaacagaaataata
gaaggtccgagtggaaaaataaactacagtgatgtgagattcgtctggacgggaacagat
gacaggacgccgacttcagagctcgtttacgcctacaaactagaaggttatgatgcagat
tggtcctggacttcagacacaagcaagaactacagcctaccaaatggtaattacacattt
aaagtaaaggcgaaggataaggctggaaatgtcgatccgacaccggcagaaagaactttc
actgtttcggtcgaaaatcaaccaccggtcgcatcctttacatattctccacaacatcct
aaggttaatgaaaacataacattcaacgcctcattgagctatgacccggatggaacaatc
gtagaatacgaatgggacttcggagatggaaacatcacgagcacaacagaagaaataata
aaacatttctattcagaaacaggtatttatgaggtaacgctaacggtaacggacgatgaa
ggtgcgacgaattcaactacaaaagaaataacggtgcaacctgcatctgaagcgaatatc
tcgtttaatccctcgagatctatcatcggcgtaggtttaaccgcggaaataaatctaatt
cttgataaggctcaaaatggtctttcaggctacaatataacagtgtcattatccaacgca
accgtagctgaaatcacatctgtaagcttccctgactgggcaactttacactccaattca
acactccccgccgactcattgtggataaaggctgtcgatctcaatgataaaataaaaagc
ggagctacgaacatcacactcgcaacgataacgctaagaggcgataaacaaggaataagc
gacatcctcatgacggttacaaagatggacgatgacaacggcaatccaattgatctgaat
gccgtatctggtaaggtagaagtcataggagtggttccattccccggatgcgagaatccg
ccgacagaccctgacggagatggtctctacgaggacataaatggaaatgggagaaaaggc
ttcaacgatgtcgttgtgttcttcaactatttgaaatgggtggaggagaatcagccttgc
atagaatgcttcgacttcaacaaaaatggtcgtatagatttcgatgatgttgtgaagtta
tttgaggagatataa
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integrated database retrieval system
