KEGG   Candidatus Methanospirare jalkutatii: N2V74_01590
Entry
N2V74_01590       CDS       T09964                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mjk  Candidatus Methanospirare jalkutatii
Pathway
mjk03030  DNA replication
mjk03410  Base excision repair
mjk03420  Nucleotide excision repair
mjk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mjk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    N2V74_01590
   03410 Base excision repair
    N2V74_01590
   03420 Nucleotide excision repair
    N2V74_01590
   03430 Mismatch repair
    N2V74_01590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mjk03032]
    N2V74_01590
   03400 DNA repair and recombination proteins [BR:mjk03400]
    N2V74_01590
Enzymes [BR:mjk01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     N2V74_01590
    6.5.1.6  DNA ligase (ATP or NAD+)
     N2V74_01590
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     N2V74_01590
DNA replication proteins [BR:mjk03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    N2V74_01590
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     N2V74_01590
DNA repair and recombination proteins [BR:mjk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     N2V74_01590
   NER (nucleotide excision repair)
    Other NER factors
     N2V74_01590
   MMR (mismatch excision repair)
    Other MMR factors
     N2V74_01590
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Polyketide_cyc
Other DBs
NCBI-ProteinID: UYZ40417
LinkDB
Position
305455..307206
AA seq 583 aa
MRYSELVEVCEEIEATTKRLEMTDLLVKLFKKTPAELIDKVIYLIQGKIYPDFVGIKLGI
AEKLAIKAISQAYGVDKNEVLRDFKRLGDLGTVAKELAAKRTQAVLASAPLTVERVHETL
DEIARASGARSQEAKIGLLAGLLSDANPKEAKFIVRTVTGKMRLGIADMTILDALAIAYT
GEKENRKHIERAYNTSSDLGDVAKTLATSGLEGIKNYKIRVGRPIRMMLAQRLASADEIL
NKLGGEAACEWKYDGERIQIHKKGKEVILFSRRLENITEQYPDVCATVREHVRCNEAIIE
GECVAVHPDTGELLPFQELMHRRRKYGVEDAAKKFPVSLFLFDVLYMDGEDLTQQEYIVR
RKKLEEIVRCDERIRLTEMLRTSDLGEVERFFEHAIEAGCEGLILKALNGVYQAGARGWL
WIKLKRSYQSKMVEPIDVVVVGAFHGRGRRSGSYGALLAAVYDKENDVFTTISKVGSGFK
DEDLENLPKMLSPYEIEHVHPRVKSEIEADVWFTPSVVMEIIGDELTLSPVHTTAFGKIR
EGAGIAVRFPRFTGRWRFDKSPEDATTVEEIVEMYKSQLKKVE
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgaggtattcggagcttgtggaagtctgcgaggagatagaagcgacgacgaagcgtctg
gagatgacggatttgcttgtgaaactattcaagaagacgcctgctgagctcatagacaag
gtaatttacctgattcaagggaagatttatccagattttgtcggaataaagctcggaata
gcggagaaattggcaataaaagcgatttcgcaggcttacggcgttgataagaacgaagtg
cttcgtgatttcaagcgactcggcgacttggggacggttgcgaaagagcttgcagcgaaa
agaacgcaagcagttttggcatccgctccgctgacggttgagcgagtgcatgagacgctt
gatgaaatagcgagggcttcaggcgcaaggagtcaagaggcgaaaatagggttgcttgcg
ggcttactctcggacgcaaatccaaaagaggcgaagttcatcgtcaggacggtaacagga
aaaatgcggctcggaattgcggatatgacaatacttgatgcgctcgcaatcgcatacaca
ggtgaaaaggaaaacagaaaacacatagagcgagcatacaacacgagttcagatttagga
gatgttgcgaaaacccttgcaacttcaggcttagaaggcataaaaaactacaaaatacgg
gtggggagaccgataaggatgatgctcgcacaacgcttggcatctgcggatgaaattttg
aataaattgggtggcgaggctgcttgcgagtggaagtatgatggggaacgcattcagatt
cacaagaaaggtaaagaggtcattctattctcaaggcgacttgaaaacataactgagcaa
tatcctgatgtttgtgctaccgtgagggagcatgtgcggtgcaacgaagcgattattgag
ggcgagtgcgtcgcagtgcatccagacactggcgagctgcttccatttcaagagctaatg
catcgccgtcgcaaatatggtgttgaggacgctgccaaaaaatttcctgtgagtttgttc
ctttttgatgtcctttacatggacggagaagaccttacgcagcaagaatacatcgttaga
aggaagaaacttgaggaaatagtgcgttgcgacgaaagaataaggctcactgaaatgctt
cgcacatcagatttaggcgaagtggagcgattttttgagcatgcgatagaagcgggatgc
gaaggtctcatcctgaaggcgttgaacggtgtctaccaagcgggagctcgtggctggctc
tggataaagttgaagcgaagttaccagtcaaagatggttgagccgatagatgttgttgtc
gttggcgcttttcacggcagaggtcgccgctcaggcagttacggtgctttacttgctgcc
gtttacgacaaagagaacgatgttttcacgacaatttcaaaggttggcagcggtttcaag
gacgaggatttggagaatctgccgaaaatgctctcaccttacgagattgagcatgtgcat
ccgagagtgaagagcgaaatagaggcggatgtttggttcacgccgagtgtagtgatggaa
ataataggcgacgaactgacattgagtcctgttcacacgacagcattcggtaaaatacgg
gaaggtgcgggcatcgcagtcagatttccgagattcacgggcagatggaggtttgataag
tcgcctgaagacgctactaccgttgaggaaatcgttgaaatgtataaatctcaattgaaa
aaggttgaataa

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