Candidatus Methanospirare jalkutatii: N2V74_07100
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Entry
N2V74_07100 CDS
T09964
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mjk
Candidatus Methanospirare jalkutatii
Brite
KEGG Orthology (KO) [BR:
mjk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mjk03016
]
N2V74_07100 (endA)
Enzymes [BR:
mjk01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
N2V74_07100 (endA)
Transfer RNA biogenesis [BR:
mjk03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
N2V74_07100 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
SCVP
Motif
Other DBs
NCBI-ProteinID:
UYZ39949
LinkDB
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Position
complement(1447269..1448459)
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AA seq
396 aa
AA seq
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MVRGVLRKAKVAEGEEIVFVSLIEESRGGKGSKGKGGSEKAKAWLEDGRLSLEEAAFLVE
KGKLRVEDAEGKELSVEGFLSVALAIQPRFMLRYIVFKDLRERGYAVRCGTDFFWLFPRG
SKGEKPAKAFIRIFSERDAVSLAEIEKLVSLAENMRKEAILAIVDEESDITYYEVRSFKA
ADTLRNEAEEQKEGGRKEGATAAEASLLGDRVFIWDAETARHIHDFGTLTQEGKLQLSLV
EAAYLLKKGIISVKNASEDARASAKAKAKAKVGVAGEECENVKEAVSARMDFSQFVKHAS
AVDECFSAKFAVYEDLREQGLIPKTGFKFGSHFRVYEASCDKHSAFLVHVLPAEHTFSTH
ELARAVRLAHGVRKRMLFAFIRNGGVKYVEVARKKL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaggcgttcttcggaaagcgaaggtggcagagggcgaagaaatcgtttttgtc
tctctaattgaggagagtaggggcggtaaggggagtaagggcaaaggtggtagtgagaag
gcaaaagcgtggcttgaagacgggcgtctttcgcttgaggaagcagcatttctggtggag
aagggcaaattgcgtgtggaggatgcggagggaaaggagttaagtgttgaggggtttttg
agtgttgcccttgcgattcagccgagattcatgctccgctacatcgtgttcaaggactta
agggaacgaggatatgctgtccgctgtggaacggatttcttctggctcttccctcgtggc
tcaaagggggagaagcctgcaaaggcgttcattcgcattttctccgaaagggacgctgtc
tctctcgccgaaattgaaaagctcgtctctctcgccgaaaacatgcgaaaggaggcgatt
ttggcaattgtcgacgaggaaagcgacatcacctactacgaagttcgctcattcaaagcg
gcggacacgcttcgcaacgaggcggaagagcaaaaagagggcggaagaaaagagggagca
acagcagcggaagcgagcctgctcggcgacagagttttcatttgggatgcggagactgcg
aggcacatccacgacttcggcacactcacgcaagaaggaaaacttcaactctctctcgtt
gaagcggcttacctgctcaaaaagggaatcatttcggtcaagaatgcgagtgaggatgcg
agggcgagtgcgaaggcgaaggcgaaggcgaaggtgggggtagcaggggaagaatgtgag
aatgtgaaagaagcagtttccgcaagaatggatttttcccaattcgtgaagcatgcgagt
gcggttgatgaatgcttctctgcgaaatttgcggtctacgaggacttgcgtgagcaaggc
ttaatcccgaaaacgggcttcaaattcggctcgcacttccgtgtttacgaggcttcctgc
gacaagcactccgcttttctcgtgcatgttctacccgcagagcatactttcagcacgcat
gaactcgcaagagcagtaagactcgctcacggcgtcagaaaacgcatgctcttcgctttc
atccgaaacggcggcgtgaaatatgtggaggtcgcaagaaagaaactctga
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