Candidatus Methanospirare jalkutatii: N2V74_07355
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Entry
N2V74_07355 CDS
T09964
Name
(GenBank) DHHA1 domain-containing protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mjk
Candidatus Methanospirare jalkutatii
Pathway
mjk03410
Base excision repair
mjk03430
Mismatch repair
mjk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mjk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N2V74_07355
03430 Mismatch repair
N2V74_07355
03440 Homologous recombination
N2V74_07355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjk03400
]
N2V74_07355
DNA repair and recombination proteins [BR:
mjk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
N2V74_07355
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
N2V74_07355
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N2V74_07355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
Motif
Other DBs
NCBI-ProteinID:
UYZ39996
LinkDB
All DBs
Position
1485271..1486947
Genome browser
AA seq
558 aa
AA seq
DB search
MRNWEDFMEEEIRAVAEAILCRAEDAGFVRIFSHYDADGLTSAGILCNAFLRKGIPFHTS
IVPKLSPQLLQALRAEDGLILLCDMGTAQLDAVLEQLSGKNIVIIDHHAPPPPPNEPPQL
PRTLETSSFSANAANEHSSALAAFSPSVLLNKTVAIFTSQEAEGAVGAVGAGEASEVRDL
VCEVPSITLLNPVAVTGKDEDAFCAASLAYLVAKHLGNNTDLAGLALAGALGDRQQLSEG
VNRQILDEALNAGVVSARKGLKLSGESLREALLFSTDPYTELAGSPEMVEAFCEDVGVPA
ERKISELTEEEQQRIADALVALLHTPHPHEGRGEGESEKEGTRNEAGEEAGEETESVSEK
ALRLYEDALFGTTFILNEEVIASAEEFMRIIDACGRFGKGGIGIALCLRDESVLEDARRL
HRKFQTKLVLELRRVRESRQRATTAVKEMPNLYYFFVRERGITGVLAGILARYIFVDKPV
VVLNTIGKPENETKISARCGTLLKGVVDLSTAVSVAALKVGGFGGGHPSAAGASIPAGTE
KAFIEEVNRIVSEQRKSH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaattgggaggatttcatggaggaagaaatcagggcggttgcggaggcgattctg
tgcagagcggaggatgcgggcttcgtcagaatattctcgcactacgacgcagacggtctc
acatctgcgggaattctctgcaacgcattcctccgtaaaggaatccctttccacacgagc
atcgtccccaagctctcgcctcaattacttcaagcgttgagagcggaggatggcttgatt
ctcctctgcgacatgggaaccgcacagttggatgcagtgcttgagcagctctccggaaaa
aatatcgtgattattgaccaccacgcaccgcctcctcctccaaacgaacctccgcagttg
ccgagaacgcttgagacctcctccttttctgctaacgctgctaacgaacattcttccgct
ctcgctgcgttttctccttctgtgttgctaaataagacggtggcaattttcacatcgcaa
gaagcggaaggagcagtaggagcggtaggagcaggagaagcgagtgaagtaagagattta
gtatgcgaagtgccttcaataacgctcttgaatcccgttgcggtcacaggaaaggacgag
gacgcattttgcgctgcgagcctcgcatacctcgttgcgaagcatctcggaaataacacc
gacctcgcaggcttggcactcgcaggcgccctcggcgaccgtcagcaattgagtgaaggt
gtgaacaggcaaattctggatgaggcgttgaatgcgggcgtcgtctctgcgaggaaggga
ctcaagctcagcggagaaagtctgcgtgaagctctgcttttctcaaccgacccctacaca
gaactcgcaggctcgccagaaatggtggaagccttctgcgaggatgtgggtgtgcctgcg
gagcggaaaatttctgaactgactgaggaggaacagcagagaatagcagacgctttagtc
gctctcttgcacacaccgcatccccacgagggaagaggcgagggagagagtgaaaaagag
ggaacgaggaatgaagcaggggaagaggcgggggaagagacggagagcgtcagcgagaag
gcgttgaggttatatgaggatgcgctgttcggcaccacattcattctgaacgaggaggtt
attgcatccgctgaagagttcatgcgaataattgatgcttgcggcaggttcgggaagggc
ggaatcggaatcgctctctgcttaagagacgagagtgtgcttgaggatgcccgcaggctg
cacagaaaatttcagacgaaacttgtgttggagttgaggcgtgtgcgtgagtcccgtcag
cgagcaacgacagcggtgaaagagatgcctaatctatactacttctttgtgcgagagcgg
ggcatcacaggcgtcctcgcaggcatcctcgcaagatatatttttgtggacaagcctgtt
gttgtgctgaacacgattggtaagccggagaacgagacgaagatttctgcgaggtgcgga
acgcttctgaagggcgttgttgacctctcaaccgcagtgagcgtcgcagctcttaaggtc
ggaggtttcggcggaggtcacccgtcagcagcaggcgcctcaatacccgcaggcacagaa
aaagcgttcattgaagaggtcaatcgcatcgtcagcgagcaacgaaaatctcattag
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