Candidatus Methanospirare jalkutatii: N2V74_07445
Help
Entry
N2V74_07445 CDS
T09964
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mjk
Candidatus Methanospirare jalkutatii
Pathway
mjk03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mjk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
N2V74_07445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjk03021
]
N2V74_07445
Transcription machinery [BR:
mjk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
N2V74_07445
Prokaryotic type
Archaeal type
TFB
N2V74_07445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
A2L_zn_ribbon
Sigma70_r4_2
HTH_24
HTH_11
Ribosomal_S27e
HTH_Tnp_ISL3
HTH_Mga
Lar_restr_allev
Trm112p
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
UYZ40013
LinkDB
All DBs
Position
1504431..1505438
Genome browser
AA seq
335 aa
AA seq
DB search
MRALSAEASRHHNQKEGSEVEKSEAGEADKKVAGEEESRERQEEEREGIERVKECPECHS
KNLVWDYERAELFCGDCGLVIAENLVDLGPEWRAFDFEQASRRERVGAPMTYRIHDKGLS
TLVTSKGLEPLGRWHIAHITNTSERSFIYALSEIDRMASALKLPMNIREAAAKLYRKVME
KNLIRGRSIEGITSAILYITCRQYGVPRTLEEIKAVSRVSQREISRAYRFLLRELDIHLP
PASPIEFVPRFCSRLGLGGDVRAKAIEIIKKAQEKKLTNGKGPIGVAAAAIYIAAILSGK
HKTQKEISEATGVTEVTIRNRYRELSEKLDIKILI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgctttcagcggaagcgagcaggcatcataatcaaaaagaggggagcgaagta
gagaagtcagaggcgggagaagcggataagaaggtggcgggagaggaggaaagtagggag
cgtcaagaagaggagcgtgaggggattgagcgagtgaaggagtgtccggaatgccactca
aagaatttagtgtgggactatgagcgagctgagctgttttgtggcgattgcggtctcgtg
attgcggagaatcttgttgatttgggacctgagtggcgagcatttgactttgagcaggca
tcacgcagagaaagggtcggtgcgccgatgacttacagaatacacgacaagggcttgagc
acactcgtcacatcaaagggtcttgaacccctcggcagatggcatatcgcccatatcaca
aacacaagtgagcgctctttcatatatgctctctctgaaattgacagaatggcttcagca
ttgaaacttcctatgaacattagggaggctgccgctaaattatataggaaggtgatggag
aagaatttgataagaggtcgcagcatagagggcataacttccgctattttgtatataaca
tgcaggcagtatggggttcctcgcacacttgaggagataaaggcggtgtcaagggtatct
cagcgggaaataagccgtgcttacaggtttttgttgcgagaattggacattcatttgcct
cccgcatcaccgattgagtttgtcccacgattctgctctcgcttggggttgggaggagat
gtccgtgcgaaagccattgagattataaagaaggcacaggagaagaaactcacaaacgga
aagggtccgataggcgttgcagccgccgcaatttatattgctgcgattctcagcggtaag
cacaaaactcaaaaggaaatatctgaggcgacgggcgtcactgaagtcactatccgcaac
cgctaccgagaactctccgaaaaacttgacattaaaatcttaatttaa
DBGET
integrated database retrieval system
