Candidatus Methanospirare jalkutatii: N2V74_08000
Help
Entry
N2V74_08000 CDS
T09964
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mjk
Candidatus Methanospirare jalkutatii
Pathway
mjk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mjk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N2V74_08000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjk03021
]
N2V74_08000
Enzymes [BR:
mjk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N2V74_08000
Transcription machinery [BR:
mjk03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
N2V74_08000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
NTPase_1
Styelin
GreA_GreB_N
Motif
Other DBs
NCBI-ProteinID:
UYZ40116
LinkDB
All DBs
Position
complement(1621348..>1623787)
Genome browser
AA seq
812 aa
AA seq
DB search
IHIGFVKRIQKILSATCRACGRVLLADVEREEFMEEIERARERGDLDVFEEVVKRVLKTA
SSRSECPFCGERQARITLEKPAAFYEVEGEKGGEVKKRRLMPTDVRERLERIPDEDVRLL
GMDPESARPEWMVLTVLPVPPVTARPSITLETGQRSEDDLTHKLVDIIRINQRLIQNRDA
GAPQLIIEDLWELLQYHVATFLDNEMPGVPPARHRSGRPLKGIAQRLKGKEGRFRGSLSG
KRVNFSARTVISPDPNISIDEVGVPEQIAKELTVTVHVTPRNLEEMRETVRRGTEHPGAN
YVRRPDGKKLKITEKNRETLASELDVGWKVERHLRDGDIVLFNRQPSLHRLSIMAHYVKV
MPGKTFRLNPAVCPPYNADFDGDEMNLHVLQTEEARAEAKILMEVQENIISPRFGRPIIG
GLHDHITGMFMLTHGEKRFKKEEVLEFLRGIDFEDLPAPAGFENGEPFWTGKQIFSMLLP
SDLNMRFRAKFCEKCYERGEECKEERCERDAFVVIENGQLLHGVIDDKAIGAFKGEIIDE
IYRKKGASAAKEFINKFTKLAINYIMRRGFTYGIDDSDLPSEAKEIIREEILRSATKKVE
ELLAAYSVGELEPLPGRTEEETLELLVMQELGRARDDAGEIAGKYLDVENPAVLMAKSGA
RGSMLNLTQMSACVGQQAIRGERVKRGYQDRTLPHFKRGDLSAFARGFVKSSFKDGLSPI
EYFFHAAGGREGLVDTAVRTSQSGYFQRRMINALQDLSVRYDGTVREARGRIVQFSYGDD
GVDPSKSRYERHIEEIVEEELANVLGEGRRGE
NT seq
2440 nt
NT seq
+upstream
nt +downstream
nt
catccatatagggttcgtgaaacggatacagaagattttgagtgcaacttgcagggcatg
cggtagggttcttcttgcggatgtggagcgagaggaattcatggaggagattgagcgtgc
tcgtgagagaggggatttggatgtgtttgaggaagttgtgaagcgagtgctgaagaccgc
atcctctcgttcggaatgtcctttctgcggagagcgtcaggctcgcatcacgcttgagaa
gcccgctgctttttacgaagttgagggcgagaaagggggcgaagtgaagaagcgtaggct
gatgcccacggatgtcagggagcgccttgagaggattccggacgaggatgtgcgcttgct
tgggatggaccctgagagtgctcgtcccgaatggatggttctcaccgttttacctgttcc
gcctgtgactgctcgcccatcaatcacgcttgaaacgggtcagagaagcgaggatgacct
cacgcataagctcgttgacatcattcgcataaaccagaggctcattcagaacagagatgc
gggcgcccctcaacttattattgaagatttgtgggagctgctgcaataccatgtggcgac
cttccttgacaacgagatgcccggtgttccgcctgcgaggcacaggagcggaagacctct
taagggaatcgctcaaaggctgaaaggaaaagagggtcgcttcagaggctcgctctcagg
taagcgggtgaatttctccgctcgcacggtcatatcgccagacccgaacatcagcataga
tgaagtgggcgttccagagcaaatagcgaaagaactgacagtgacggttcatgtgacgcc
tcgcaacttggaggaaatgcgtgagacagttcgcagaggcaccgaacatccgggcgcaaa
ttatgtccggagacctgatggaaagaagctgaaaatcacggaaaagaacagggagactct
cgcatctgagcttgatgtcggctggaaggttgagcgacacttgagagacggcgatattgt
gcttttcaacaggcaaccctcgctacaccgcttgagcatcatggctcactatgtgaaagt
gatgccaggaaagactttcaggttgaatcctgcggtctgtccgccttataatgctgattt
tgacggcgacgagatgaacttacatgtcttgcagacggaagaggcgagggcggaagcgaa
aatattgatggaagttcaggagaatataatatcaccacgcttcggcagaccgataattgg
agggctacacgaccacataacaggcatgttcatgctcacgcacggcgagaagcgattcaa
gaaggaagaagtgttggagttcctgcgtggtattgattttgaggatttgcctgctcctgc
tggttttgagaatggggagcctttctggacgggaaagcagatattcagcatgcttctccc
ttcggatttgaacatgcgtttcagggcgaagttctgtgagaagtgctatgagcgaggtga
ggagtgcaaggaggagagatgtgagagagatgcgtttgttgtgatagaaaatgggcaatt
attgcacggcgtgattgacgacaaagcgattggagcgttcaaaggagagattattgatga
gatttacaggaagaaaggggcatcagcagcaaaagaattcataaataagttcacaaaact
cgcaataaattacataatgaggcggggtttcacctatggtattgacgattctgatttgcc
gagtgaggcgaaggaaatcattcgtgaggaaattttgaggagtgcgacgaagaaggttga
ggagctgctcgctgcgtattcggtgggtgagcttgagcctttacctgggagaacggagga
ggagacgcttgagctacttgtgatgcaggagttaggtagggcaagagacgacgcaggaga
gattgcaggtaaatatttggatgtggagaatcctgcggtgcttatggcgaagtcgggagc
gagaggctcaatgctgaacttgacgcagatgagcgcttgcgtgggtcagcaggcaatcag
aggcgagagggtgaagcgtggctaccaagaccgcacactgccgcacttcaagcgaggaga
cttgagcgcattcgcaagaggcttcgtgaaatcctcgttcaaggacggtctctcgccgat
tgaatatttctttcatgcagcgggcggcagagaaggtctcgtagacacggcggtaaggac
atcgcagagcggatacttccagcgtaggatgattaatgcgctgcaagacctctccgtgcg
ctacgacggcaccgtcagggaagcaagaggaagaatcgtgcaattttcatacggggacga
cggcgtagacccttcaaagagcaggtatgagaggcatattgaggaaatcgtggaggaaga
gcttgcgaatgtgctcggagaggggagaagaggagaataa
DBGET
integrated database retrieval system
