Mycobacterium sp. JLS: Mjls_2543
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Entry
Mjls_2543 CDS
T00482
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mjl
Mycobacterium sp. JLS
Pathway
mjl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mjls_2543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjl03019
]
Mjls_2543
03400 DNA repair and recombination proteins [BR:
mjl03400
]
Mjls_2543
Enzymes [BR:
mjl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mjls_2543
Messenger RNA biogenesis [BR:
mjl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mjls_2543
DNA repair and recombination proteins [BR:
mjl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mjls_2543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
AAA_30
HEM4
P-loop_SecA
PcrA_UvrD_tudor
DUF3553
E2F_TDP
Motif
Other DBs
NCBI-ProteinID:
ABN98327
UniProt:
A0A5Q5CGI7
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All DBs
Position
2664760..2666391
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AA seq
543 aa
AA seq
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MVAVGERAAELCRTARRVFGWDELHPEQLEAMVAVLAGRDVVAVLPTGSGKSAIYQVPAV
LLDGATVVVSPLIALQEDQIAGLADTRAPEAVAINSRQRASQTDDNWAAVHSHEAEYIFV
SPEQLANDAVVGRLAEAAVSLIVVDEAHCVSAWGHDFRPDYLRLADAFAQFGNGAPVVAL
TATASVVVRREIVERLGLRDPLMVVGNFDRPNLTLEVEQFVRDADKRAAVVDTVAGLEVP
GLVYTATRKDAERYADALGERGVRAAVYHAGLAAAERERVHESFREDAVDVVVATSAFGM
GIDKPNVRFVVHASVPDSLDSYYQQIGRAGRDGGDARVLLFYRAEDLGLARFFTTHRPDA
DLIEAVYRALDTDKPTRTKALRERLDAQGRRLTNAINLLESADAIRSTRKGFYSNGIPPR
VAVEAAIEVVEARERVDRSRVEMMRGYAESRHCRRQFLLTYFGQPLPGPCGNCDRCRDGE
GATDADAGGQPAIPVDTAVSHREWGDGVVIGGDTDRVTVLFDDYGYRTLAMAAVTGKNLL
TTR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtggttgcagtaggtgagcgggcggcggaactgtgccgcacggcccggcgggtgttcggc
tgggacgaactgcaccccgaacaactcgaggcgatggtggccgtccttgccggccgcgac
gtggtggcggtgctgccgaccggttcgggtaagtccgcgatctaccaggttcccgcggtg
ctgctcgacggcgccaccgtggtcgtctcgccgttgatcgccctgcaggaggatcagatc
gccggcctggccgacacccgtgcccccgaggccgtcgcgatcaactcccggcagcgcgcg
tcccagaccgacgacaactgggctgcggtgcacagccacgaggctgagtacatcttcgtc
tcgccggagcagttggccaacgatgctgtcgtcggcaggctcgccgaggcggcggtgtcg
ctgatcgtcgtcgacgaagcgcactgcgtgtcggcgtgggggcatgacttccggccggat
tatctgcggttggccgacgcgttcgcccagttcggcaacggggcgccggtggtggcgctc
accgcgacggcgtcggtggtggtgcgccgcgagatcgtggaacggttggggctgcgggac
ccgctgatggtcgtcggcaacttcgaccggcccaacctgacgctcgaggtggagcagttc
gtgcgtgacgccgacaagcgcgccgcggtggtggacaccgtcgccgggctcgaggtaccg
gggctggtctacaccgccacccgcaaggacgccgagcgctacgccgatgcgctgggtgag
cggggcgtccgcgcggcggtgtaccacgccggactggccgccgccgaacgcgaacgcgtc
cacgagagtttccgtgaggacgccgtcgacgtggtggtggccacctcggcgttcgggatg
gggatcgacaaacccaacgtgcggttcgtcgtccacgcgtcggtgcccgattcgctggac
tcgtactaccagcagatcggcagggccggacgcgacggcggcgacgcgcgcgtgctgctg
ttctaccgggccgaggatctggggctggcccgattcttcaccacccaccgtcccgacgcc
gacctcatcgaggccgtctaccgggcgctcgacaccgacaaacccacgcggaccaaggcg
ctgcgcgaacgcctcgacgcgcagggacgccggctgaccaacgcgatcaacctcctggaa
tcggccgatgcaatccgttcgacacgaaaagggttctactccaacgggatcccgcctcgc
gttgcggtggaggccgcgatcgaggtggtcgaggcgagggaacgcgtggaccgcagccgc
gtcgagatgatgcgcggctacgccgaatcgcggcactgccgtcggcagttcctgctcacc
tacttcggccagccgctgcccggaccgtgcggcaactgcgaccgctgccgcgatggtgag
ggtgccaccgacgcggacgccggtggacagcccgccatcccggtggacaccgccgtttcc
caccgggagtggggggacggcgtggtgatcgggggcgacaccgaccgtgtcaccgtgctg
ttcgacgactacggataccgcacgctggccatggcggccgtcaccgggaagaacctgctc
acgacgcggtga
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