Mycobacterium sp. JLS: Mjls_4716
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Entry
Mjls_4716 CDS
T00482
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mjl
Mycobacterium sp. JLS
Pathway
mjl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mjl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mjls_4716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjl03400
]
Mjls_4716
Enzymes [BR:
mjl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Mjls_4716
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Mjls_4716
DNA repair and recombination proteins [BR:
mjl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mjls_4716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7577
Motif
Other DBs
NCBI-ProteinID:
ABO00482
UniProt:
A0A5Q5CM70
LinkDB
All DBs
Position
complement(4961528..4962391)
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AA seq
287 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGLPIGRVDVSAFSVLKTFDPPITALHGREVTDAHRWGKYLG
LQAGDLYLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGAAPGFDLTEAGTQK
RLAVWLVSDPSAVPGIAALGPDALELTADELGVLLSKQSGRIKTVITDQKVLAGIGNAYS
DEILHVAQLSPFATANKLTPEQVATLHDAMLSVLTDAVSRSVGQQAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGRVLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtcgaagcactggcggaccacctgcgccgtcacgccgtcgga
ctgcccatcggacgcgtcgacgtgtcggcgttctcggtgctcaagacgttcgacccgccg
atcaccgcactgcacggccgcgaggtcaccgatgcgcaccgctggggcaagtacctaggg
ctgcaggccggtgacctctacctgatcacccacctgtcccgcgccgggtggctgcgctgg
tcggacaaactggccgccgcaccgctgaaacccggtaaggggccgatcgctctgcgcgtg
catctcggcacccccggcgcggcacccgggttcgatctgaccgaggccggcacgcagaag
cgcctggcggtctggctggtgtccgacccgtccgccgtgcccgggatcgccgcgctcggg
ccggatgccctggagctgaccgccgacgagctgggggtcctgctgagcaagcagagcggg
cgcatcaagaccgtcatcaccgatcagaaggtgctggccgggatcggcaacgcctacagc
gacgagatcctgcacgtggcgcagctttccccgttcgccaccgccaacaaactgaccccc
gagcaggtggccaccctgcacgacgcgatgctctccgtgctcaccgacgcggtgtcacgg
tcggtgggccagcaggccgcgacgctcaagggggagaagcggtccgggctgcgggtgcac
gcgcggacggggctgccgtgcccggtctgcggggacacggtgcgcgaggtgtcgttcgcc
gacaagtcgttccagtactgcccgacgtgccagaccggcggccgggtgctcgccgaccgt
cgcctctcgcggctgctcaagtag
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integrated database retrieval system
