Mycobacterium sp. JLS: Mjls_5040
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Entry
Mjls_5040 CDS
T00482
Name
(GenBank) ATP-dependent DNA helicase, RecQ-like protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mjl
Mycobacterium sp. JLS
Pathway
mjl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mjls_5040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjl03019
]
Mjls_5040
03400 DNA repair and recombination proteins [BR:
mjl03400
]
Mjls_5040
Enzymes [BR:
mjl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mjls_5040
Messenger RNA biogenesis [BR:
mjl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mjls_5040
DNA repair and recombination proteins [BR:
mjl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mjls_5040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
KORA
Motif
Other DBs
NCBI-ProteinID:
ABO00805
UniProt:
A0A5Q5CN27
LinkDB
All DBs
Position
complement(5281295..5283370)
Genome browser
AA seq
691 aa
AA seq
DB search
MPTRDDAQALLEQLAGPQATLRDDQWTAIEALVVHRRQALVVQRTGWGKSAVYFISAKLL
RAAGRGPTVIVSPLLALMRNQVAAAERAGVRAATINSGNVAEWEDIHARVQGGDLDVLLV
SPERLNNPDFRDNVLPALAADAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIAELGQDIPV
LATTATANDRVVDDVATQLGVGGRDTLVLRGGLDRESLRLSVVHAGNPAQRAAWIAAHLG
DLPGSGIVYTLTVAQAHDIAALLREHGHPVAAYTGSTDPTEREQLEADLLANRVKALVAT
SALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATSSAEVVLLPGREDQEVWRYFAS
VAFPSEAMVRNVIDALETDRPQSTPALEPLVDLNRSRLEMVLKVLDVDGAVRRVKGGWLS
TGAPWSYDEPRYRKLDEARRREQQAMLDYQSTDGCRMAFLRRQLDDPELREGDRCGRCDN
CTGNRLSAEVDATAAEDTRQRLMRPGVELSARKQWPSGLAKLGLDLSGRIHDGPATGRVI
GRLTDLGWGARLRKVLDEPDGEVSEDVVRAAIDVLAAWNWQQRPVAVLAMDSETHPILIR
SLARRLAELGRLIDLGTLQYRPGRRPVTAANSAYRVAALRDSWETPDLDVNGPVLLVDDL
TDTGWTLTMAARVVRSAGAPEVLPFALAAVS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgccgacccgtgacgacgcccaggcgctgctcgaacaactcgccggcccgcaggccaca
ctgcgcgacgatcagtggaccgcgatcgaggcgctggtggtgcaccgccgccaggcgctc
gtggtgcagcgcaccggctgggggaagtcggccgtctacttcatctcggccaaactgctg
cgcgccgccggccgcggacccacggtgatcgtctccccgctgttggcgttgatgcgcaac
caggtcgcggccgccgagcgcgccggcgtgcgggcggccaccatcaactccggcaacgtc
gccgaatgggaggacatccacgcgcgggtgcagggcggtgacctcgacgtcctgctggtc
agtcccgagcggctcaacaacccggacttccgcgacaacgtgctgcccgcactggcggcc
gacgccggtctggtggtggtggacgaagcgcactgtgtgtccgactggggtcacgacttc
cgccccgactaccgccggatccgcaccctgatcgcggagttgggccaggacatcccggtg
ctggccaccacggccaccgcgaacgaccgggtggtcgacgacgtggccacccaactcggg
gtgggcgggcgcgacaccctcgtgctgcgcggcgggctcgaccgcgaatcgctgcggctg
tcggtggtccacgcgggcaaccccgcgcagcgggccgcctggatcgccgcgcacctcggc
gacctgccgggttcgggcatcgtctacacactcaccgtcgcccaggcccacgacatcgcg
gcgctgttgcgcgaacacgggcacccggtcgccgcctacacgggttccaccgatccgacc
gagcgcgaacaactcgaggccgacctgctggccaaccgggtcaaggcgttggtcgcgacc
tcggcgctcgggatggggttcgacaaaccggatctcggcttcgtggtccatctcggtgcg
ccgtcctcaccgatcgcctattaccaacaggtgggccgcgccgggcgtgccacgtcgagc
gccgaggtggtcctgctgcccggtcgcgaggaccaggaggtctggcggtatttcgcctcg
gtggccttcccgtcggaagccatggtgcgcaacgtgatcgatgcactcgagacggaccgg
ccgcagtccaccccggcgctcgaaccgctcgtcgacctcaaccgcagccgcctggagatg
gtgctcaaggtgctcgacgtcgacggggccgtgcggcgggtcaagggcgggtggctcagc
accggtgcgccgtggagctacgacgaaccgcgctaccgcaaactcgacgaggcgcgccgg
cgcgaacagcaggcgatgctcgactaccagagcaccgacggatgccggatggcgttcctg
cgccgccaactcgacgaccccgaactgcgcgaaggtgaccggtgcggccgctgcgacaac
tgcacgggcaaccggctgtccgcggaggtcgacgcgaccgcggccgaggacacccggcag
cggctgatgcgcccgggtgtcgagctcagcgcgcgcaaacagtggccgtcggggttggcg
aagctcggtctcgacctgagcgggcgcatccacgacggccccgcgacaggccgggtgatc
ggcaggctgaccgatctgggctggggcgcccggctacgcaaggtgctcgacgaacccgac
ggtgaggtctccgaagacgtggtgcgcgccgcgatcgacgtgctggcggcctggaactgg
cagcagcgtcccgtcgccgtactggcgatggactccgaaacccatccgatcctgatccgg
tcgctggcccgccggcttgccgaactcggcaggctcatcgacctgggcacactgcagtac
cggccgggccgacggccggtgacggcggcgaactccgcgtaccgcgttgcggcgctgagg
gattcgtgggagacgccggatctcgacgtgaacggtccggtgctgctcgtcgacgatctc
accgacaccgggtggacgctcaccatggcggcccgggtggtccgttccgccggcgccccc
gaggtgctgccgttcgcgctggccgccgtcagctga
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