KEGG   Metallosphaera javensis: MjAS7_0733
Entry
MjAS7_0733        CDS       T07999                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mjn  Metallosphaera javensis
Pathway
mjn03030  DNA replication
mjn03410  Base excision repair
mjn03420  Nucleotide excision repair
mjn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mjn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MjAS7_0733
   03410 Base excision repair
    MjAS7_0733
   03420 Nucleotide excision repair
    MjAS7_0733
   03430 Mismatch repair
    MjAS7_0733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mjn03032]
    MjAS7_0733
   03400 DNA repair and recombination proteins [BR:mjn03400]
    MjAS7_0733
Enzymes [BR:mjn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MjAS7_0733
    6.5.1.6  DNA ligase (ATP or NAD+)
     MjAS7_0733
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MjAS7_0733
DNA replication proteins [BR:mjn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MjAS7_0733
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MjAS7_0733
DNA repair and recombination proteins [BR:mjn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MjAS7_0733
   NER (nucleotide excision repair)
    Other NER factors
     MjAS7_0733
   MMR (mismatch excision repair)
    Other MMR factors
     MjAS7_0733
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase PHA_synth_III_E
Other DBs
NCBI-ProteinID: BCS92125
LinkDB
Position
complement(575100..576896)
AA seq 598 aa
MKFKLIAEYFDRLEKISSRIQLTSLLSDLFKNTDREVIDKVVYLIQGRLWPDFTGMPEIG
MGEKFLIKAVAMAYGNKEEEVEKLYKSVGDLGEVAYSLRSKVKGVSILSFVGGSQEAGEL
EVTEVYNELVKIATSTGEGSRDIKIRIFAGLIKKATPIEAKYLVRFVEGRLRLGIGDATV
LDALAITYGGSADYRPIVERAYNLRADLGDIARIIATEGIEKLKNISPTPGIPIRPMLAE
RLPDPEEIMEKMNGKALVDYKYDGERAQIHKSGDKVTIFSRRMENITDQYIDVTEYVKQS
VKGDNFIVEGEIVPVDPESGEMRPFQELMHRRRKNNIAEAIKEYPVNLFLFDLMLFNGED
YTTKPLPERRAKLEEALTSNDKIYIASHIIADNVDKLKNYFYQAISEGAEGVMVKSIGPD
SIYQAGSRGWLWIKLKRDYQSEMADTVDLVVVGAFYGKGKRGGKFSSLLMAAYNPEKDVF
ETVCKVASGFSDQELDELQRKINELRREQKHPRVVSDMIPDVWVSPTLVAEVIGAEITIS
PLHTCCRNEKGGLSIRFPRFIRWRDDKSPEDATTNQEIMEMYSKQLKKIEEKPVDENI
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgaagtttaagcttatcgcggaatattttgatagacttgaaaaaatatcctctagaata
cagctaacatctctactttctgacctattcaagaacactgatagggaggtaatagacaag
gtggtatacctgattcagggaaggttatggccagacttcactggaatgcctgagataggc
atgggcgagaaattcctgattaaggctgttgcaatggcatacgggaataaggaagaagag
gtagaaaaattgtataagagcgtaggtgacttgggtgaagttgcctactctttgaggagt
aaggtaaagggagtcagtattttatccttcgttggaggatctcaggaagccggagagctt
gaagtcactgaggtctacaatgagctggtaaagatagccactagcactggagagggaagc
agagacatcaaaataagaatcttcgcgggtctgatcaagaaggcaactcccatagaggcc
aagtacctggtaaggttcgttgagggtagattgaggctgggaataggtgacgcaacagtg
ctagatgccctagccataacatatggtgggtcggcagactacagacccatagtggaaagg
gcttacaacctgagggccgacctaggcgatatagctaggataatagcgaccgaaggaata
gagaagttgaaaaatatttctccaactcctggaattcctattagaccaatgctggctgag
aggctacctgatcctgaggagataatggaaaagatgaacggaaaggccctggtggattac
aaatatgatggtgaaagggctcagattcacaagagcggagataaggtaaccatcttctcc
aggagaatggaaaatataaccgatcagtacattgatgttacggaatacgtcaagcaatcc
gtcaagggcgataatttcattgtagagggcgagatcgtacccgtggatccggaaagcggt
gaaatgagacctttccaggaacttatgcatagaagaaggaaaaacaacatcgctgaggct
atcaaggaatatccagtaaaccttttccttttcgatttaatgctctttaatggcgaggac
tacaccaccaaaccacttccggagagaagggccaaactggaggaggccttaaccagtaac
gacaagatttatattgcttcgcatataattgctgataatgtagataaactgaaaaactac
ttctaccaggcgatatctgagggtgctgaaggcgttatggtaaaatccatagggcctgac
tccatatatcaggcaggatcaagagggtggctttggatcaagttaaagagggattaccaa
agtgagatggccgacacggtggatctggtagttgtgggagccttttacggaaagggtaag
aggggcggtaagttcagttccctactgatggccgcttataaccctgagaaggacgtgttc
gagacagtttgtaaggtagcctctggtttcagcgatcaggaactggatgaattgcagagg
aaaataaacgagctaaggagggagcagaaacatccgagggtagtatctgacatgatccca
gatgtctgggtgtctccgactcttgtggctgaggtaataggcgccgaaataacaatctct
ccccttcacacatgttgcagaaacgagaaaggaggactctctataagatttccgagattc
atcagatggagagatgataagagccctgaagatgccacaaccaaccaagagatcatggag
atgtactcaaaacagctcaagaagatcgaggaaaagcctgtagatgaaaatatctag

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