Mesobacillus jeotgali: FOF60_04410
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Entry
FOF60_04410 CDS
T08547
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mjo
Mesobacillus jeotgali
Brite
KEGG Orthology (KO) [BR:
mjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mjo03009
]
FOF60_04410 (rlmD)
Enzymes [BR:
mjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FOF60_04410 (rlmD)
Ribosome biogenesis [BR:
mjo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FOF60_04410 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
MTS
Methyltransf_11
Cons_hypoth95
UPF0020
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
UYZ24315
LinkDB
All DBs
Position
880621..882015
Genome browser
AA seq
464 aa
AA seq
DB search
MGQQKNKDQQTAKLELKQTFPLTIKRLGINGEGVGYFKRQVVFVPGALPGEEIVAEATKV
HPKFAEAKIKKIRKQSEHRIKPLCPVYDQCGGCQLQHLRYDQQLNEKRDIVIQALERHTK
LKTDDLDIRPTIGMENPWGYRNKSQFQVGEKDGKVLAGLYGLNSHNLINIEQCAVQHPAT
TKATEVVKGILQDLKIPIYNEKKHKGLVRTIVARTGVQTGELQIVLITTKKELPKKDIII
QEIQKRLPEVNSIVQNVNGEKTSVIFGNETATLEGSDFIQETLGDLQFELSARTFFQLNP
EQTVKLYNEAKAAAMLTGKEKLVDAYCGVGTIGLWMADQAGEVRGMDVIPESIEDAKKNA
IKHEVNHARFYMGKAEELLPKWLKEGWRPDVIVVDPPRTGCDDEFLKTVLKIQPKTFVYV
SCNPSTLAKDITTLSSKYKVEYIQPVDMFPHTSQIESVTRLVLK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgggccagcaaaaaaacaaagaccagcaaactgcaaagctagagctgaagcaaaccttt
ccgctgacgatcaagcgtcttggcatcaatggagaaggcgtaggctattttaagcgccag
gtcgtgtttgtgccgggtgccctgccgggtgaggaaattgtcgcggaggcgacaaaggtc
caccctaagtttgctgaggcgaaaatcaagaaaatccgcaaacaatcagagcatcgtatc
aaaccgctatgtccggtctacgatcagtgcggaggatgccagctgcagcatttgcgctat
gaccagcagctcaatgaaaagcgggatattgtcatccaggctttggagcgccatacaaag
ctgaaaactgatgacctggatatccggccgacgattggcatggagaatccatggggttac
aggaacaagagccagttccaggttggcgaaaaggacggaaaagtgcttgccggcctatat
ggcctgaactcccacaacctgatcaacatcgagcagtgtgcggttcagcatccggcaacg
accaaagctacagaggttgtaaaaggaattctgcaggatttgaagattccgatttacaat
gagaaaaagcacaaagggctcgtgcgtacaatcgttgcgagaacgggagtgcagaccggg
gagctgcaaattgtcctgatcacgaccaagaaagagctgccgaaaaaggatatcatcatc
caggaaatccaaaagcgtcttcctgaggttaactcgattgtccaaaacgtcaatggggaa
aaaacttcggtcattttcggaaacgaaactgcgactctggaaggcagcgattttatccaa
gagaccttgggcgacctgcagtttgaactgtcagctcgtacattcttccagctgaatcca
gaacagactgtcaaactctacaatgaagcgaaagcagctgccatgctgacaggtaaggaa
aaacttgtggatgcctactgcggggttggaacgattggcttgtggatggccgatcaggcc
ggcgaggtccgcggaatggatgtcattccggaatcgatagaagatgcaaagaaaaatgcc
attaagcatgaagtgaatcatgccaggttctatatgggcaaagcagaagaactgcttccg
aaatggctgaaggaaggctggcgtccggatgtgatcgtcgtcgatccgccgcgtacaggc
tgcgatgacgaattcctgaagaccgtcctgaaaatccagccgaaaacctttgtgtatgtc
tcctgcaatccttcaacgcttgcaaaggatatcacgacactgagctcaaaatataaagtt
gaatacatccagccagtcgatatgttcccgcacacttcacagattgagagtgtcacgaga
ctagtgctgaaataa
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