Mesobacillus jeotgali: FOF60_08680
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Entry
FOF60_08680 CDS
T08547
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mjo
Mesobacillus jeotgali
Brite
KEGG Orthology (KO) [BR:
mjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjo03032
]
FOF60_08680 (topA)
03400 DNA repair and recombination proteins [BR:
mjo03400
]
FOF60_08680 (topA)
Enzymes [BR:
mjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FOF60_08680 (topA)
DNA replication proteins [BR:
mjo03032
]
Prokaryotic type
DNA Topoisomerases
FOF60_08680 (topA)
DNA repair and recombination proteins [BR:
mjo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FOF60_08680 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_2
DUF3144
Motif
Other DBs
NCBI-ProteinID:
UYZ23595
LinkDB
All DBs
Position
1753770..1755845
Genome browser
AA seq
691 aa
AA seq
DB search
MSDFLVIVESPAKAKTIERYLGKKYKVKASMGHLIDLPKSQMGIDTENNYNPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAKSLDVDVHSDCRVVFNEITKDAIKE
SFKHPRAINMDLVDAQQARRALDRLVGYNISPLLWKKVKKGLSAGRVQSVALRMIIDREK
EIAAFVPEEYWTIGAEFLKGKSSFEASFYGIGKQKAELKSEEDVKNILKQVKGNKFTVES
VTKKERKRNPAPPFITSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSIRISEVAQGEAREYITSEYGENFIQTEARKEKKQSNAQDAHEAIRPTSTMKVPEKIK
EFLSRDQYRLYKLIWERFVASQMAPAIMDTMSVDLKNGEVTFRATGSKVKFPGFMKVYVE
GSDDQVEEKDKFLPDLREGDEVTKKEIEPKQHFTQPPPRYTEARLVRTLEEMGIGRPSTY
APTLDTIQKRGYVSLDNKRFVPTELGEVIHELMLEFFPEILDLEFTAKMEQNLDNIEDGK
INWVNVIDEFYRDFEKHLQVAEKEMQEIEIKDEPAGEDCDQCGSAMVFKMGRYGKFMACS
NFPECRNTKAIVKEIGVKCPKCEEGNIIERKSKKRRIFYGCDRFPECDFLSWDKPLARKC
PKCENMLVEKKLKKGVQVQCTECDYKEEPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattttttagtcatcgttgaatcgcctgcaaaggcaaagacgattgagcgttac
cttggaaaaaaatataaagtgaaagcctctatggggcatttgatagatttgcctaagagc
cagatgggaatcgatacagaaaataattataatcctaagtacattacgatcaggggcaag
gggcctgttctgaaggaattgaaaactgctgctaaaaaggcaaagaaagtctacctcgcg
gctgaccccgacagagaaggggaagcgattgcctggcatttggccaaaagtctcgacgtg
gatgtccattcggactgcagggttgtattcaatgaaattacaaaggatgccatcaaggaa
tcttttaaacatccgcgggcgatcaatatggacctcgtagatgcccagcaggcacgccgt
gctctggacagactggtaggatataatattagcccgctgctttggaagaaggtcaagaaa
gggctgagtgcagggcgagtgcaatcagttgctttaaggatgatcattgaccgtgagaag
gaaatcgctgcgtttgttccagaagaatattggacaatcggtgctgaattcctgaaaggc
aaaagttcatttgaagcttctttttacggaattggcaaacaaaaagctgagttaaagtct
gaagaggatgtcaaaaatatccttaagcaggtgaagggaaacaaattcactgttgagtcg
gtgacaaagaaagaacgaaagcgtaatcctgcaccgccattcattacttcttcattgcag
caggaggcagcccgaaagctcaacttcagagccaaaaagactatgatgcttgcccagcag
ctttatgaaggaatcgatcttggaaaagaaggtacagtcggtttgattacgtatatgaga
acggactccatacggatttctgaagtggcacaaggagaagcaagggaatacatcacaagt
gagtatggagaaaatttcatacagacagaggccaggaaagagaagaagcaatccaatgct
caagatgcacatgaagcaatccggccaaccagcacaatgaaggttcccgagaagataaag
gaattcctctcaagggatcagtacaggctttataaacttatctgggaacggttcgtcgca
agccaaatggctcctgcgatcatggatacgatgagcgttgatttgaagaatggagaggtt
actttccgcgcgacaggctcaaaggtcaaattcccggggttcatgaaggtttatgtagaa
ggttcggatgaccaggttgaagaaaaggataagttccttcctgaccttagggaaggtgac
gaggtcacaaagaaagagatcgaaccgaagcagcactttacacagcctcctccaagatat
actgaagcaaggctcgtcaggacgcttgaggaaatggggattggccggccatcaacatat
gcgccaaccctggatacaatccagaagaggggctatgtatcacttgataataaacggttc
gtgccgactgagcttggtgaagttatccatgagctgatgctggaattcttcccggaaatc
ctggatcttgagttcaccgccaaaatggagcagaacctcgataatattgaagatggaaaa
atcaattgggtcaacgtcattgacgaattttaccgtgattttgaaaagcatctccaagta
gctgaaaaggagatgcaggaaatcgaaatcaaggatgaacccgccggagaagattgcgat
caatgcggttctgctatggtattcaaaatgggccggtacggcaaattcatggcctgcagt
aatttcccggaatgcaggaatacgaaggcgatcgttaaggaaatcggggttaaatgcccc
aaatgtgaagaaggcaatatcattgagcgcaagagcaaaaaacgccggattttttacggc
tgcgaccgtttcccagagtgcgatttcctatcatgggataaaccacttgcaaggaaatgc
cctaaatgcgaaaatatgctagttgaaaagaagctcaaaaagggtgttcaggttcaatgt
acggaatgcgactataaagaggaaccacaaagctag
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