Mesobacillus jeotgali: FOF60_08930
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Entry
FOF60_08930 CDS
T08547
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
mjo
Mesobacillus jeotgali
Pathway
mjo03030
DNA replication
mjo03430
Mismatch repair
mjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOF60_08930
03430 Mismatch repair
FOF60_08930
03440 Homologous recombination
FOF60_08930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjo03032
]
FOF60_08930
03400 DNA repair and recombination proteins [BR:
mjo03400
]
FOF60_08930
Enzymes [BR:
mjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOF60_08930
DNA replication proteins [BR:
mjo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOF60_08930
DNA repair and recombination proteins [BR:
mjo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOF60_08930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UYZ23641
LinkDB
All DBs
Position
1802053..1806378
Genome browser
AA seq
1441 aa
AA seq
DB search
MSDLSSGKKERFQLLLQQLQLTEDAIVTHFQNAEIDRVVIEKQARKWHFFFQFERIIPCQ
LYNTFIGKLEQTFSHIAKISYSVKVLEQAISEKEILDYWKSCIKEIDGIAPPLLKLLNEQ
VPQIHGTKLILTARNEAEGLALKRKYGGIIAEIYQSFGFPLLTIDTVVSEESSSDEYEKF
MKAKEKEDQERGLMAMIEMQKKEAEQAKGDGAPQEGPVTIGLTIKDDADFRKLEDIVDEE
RRVAVEGYVFFAETKELRSGRTLLTFKITDYTSSIMVKMFSRDKEDAAIYQRITKGMWLK
VRGSIQNDTFVRDLVMIGNDVNEIKPKGRIDSAPEGEKRVELHLHTPMSQMDAVSSVSAL
VSQAAKWGHKAVAITDHAVVQSYPEAFGAGKKNDIKILYGVEINLVDDGVPIAYNDAHRL
LADDTYVVFDVETTGLSAVYDTIIELAAVKIRDGEIIDRFESFANPHHRLSATTINLTGI
TDDMVRNAPEVSEVLKKFKEWSGDCVLVAHNASFDMGFLNVGYKKIGMGKAQNPVIDTLE
LGRFLYPDMKNHRLNTLAKKFDIELTQHHRAIYDAEATGYLLVKMLKDAAEKGLEYHDQL
NDNMGQGKAFQRARPYHATLLAKNEVGMKNIFKLVSISHIDYFYRVPRIPRSLLNKHREG
ILIGSGCDKGEVFEGMMQKGPEEVEEAAQFYDYLEVHPKAVYAHLLELELVRDQKALEDI
INNIVKLGEKLDLPVVATGNVHYLNENDKIYRKILINSQGGANPLNRHELPDVHFRTTNE
MLDAFKFLGEEKAKEIVVENSNKIADMIDVIKPIKDDLYTPKIEGADEEMRSMSYGMARS
IYGDDLPEIVEARLEKELKSIIDNGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSFVAT
MTEITEVNPLPPHYVCPKCKKSEFFNDGSVGSGFDLPDKDCPECGIKYKKDGHDIPFETF
LGFKGDKVPDIDLNFSGEYQPRAHNYTKVLFGEDYVYRAGTIGTVADKTAYGYVKGYQGD
NNLQLRGAEIDRLASGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQFPADSSTSEWKTT
HFDFHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGTESLGVTE
EQIMSKTGSLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNI
CNLSEVIGCRDDIMVYLIYQGLEPAFAFKIMESVRKGKGLTDEMEEEMRKNKVPEWYIDS
CKKIKYMFPKAHAAAYVLMAVRIAYFKVHHPLMYYAAYFTVRADDFDVDAMVRGSESIRA
VIEEISAKGLDASTKEKNLMTVMELALEMCERGFGFAKVDLYKSSASEFIIEGDKLIPPF
NAIPGLGTNAAINIVKAREEGEFLSKEDLQQRGKISKTILEYLDNHGCLEGMPDQNQLSL
F
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatctttcttcgggaaaaaaagaaaggtttcagctcctgctgcagcagctgcag
ctaacagaagatgcaattgtcactcattttcaaaacgctgaaattgacagggtagtgatt
gagaaacaggcaaggaaatggcatttctttttccagtttgaaagaatcattccttgtcag
ttgtataacacattcattggcaagctggaacagactttctcacatattgcgaaaatatca
tactcggtaaaagtgcttgaacaggcaatcagtgaaaaggaaatcttggattattggaag
tcatgcatcaaagaaatagatggcatcgcgcctccgttgttaaagctcctgaatgagcaa
gttccgcaaatccatggcacaaaactcattttaacagccaggaatgaagccgaaggactt
gcacttaagcgtaaatatgggggcattatagccgagatttaccagagttttggtttccct
ttactgacgattgatacggttgtaagtgaagaaagttcttcagatgaatatgaaaaattc
atgaaggctaaagagaaggaagaccaggaacgcggtctgatggcaatgatcgagatgcag
aagaaggaagctgaacaagccaagggagatggcgcgccgcaggaaggcccggttaccatt
ggacttacaatcaaggatgatgctgacttccgcaagcttgaagacatcgttgatgaagag
cgccgcgtagccgtcgaaggctatgtattctttgctgaaacaaaagagcttcgcagcggc
aggacgctattgacattcaaaattacggactatacaagctccatcatggtaaaaatgttc
tcccgcgataaggaagatgccgcgatttaccagcgcattacaaaaggaatgtggctaaag
gtaaggggcagcatccagaacgacacctttgtccgcgatcttgtcatgattggaaatgac
gtgaatgaaataaagcccaaaggaagaattgattctgcgccagaaggcgaaaaaagagtc
gagcttcatttgcatacaccaatgagccagatggacgcagtgtcatctgtcagcgcactg
gtttcccaggcagcaaagtggggccacaaagcagtggcaattactgaccatgcagttgtg
caatcctacccggaagctttcggggcagggaagaaaaatgatatcaaaatcctatacggt
gtggaaataaacctcgttgatgacggtgtgccaatcgcgtataatgatgcgcacagattg
ctggcagacgatacgtatgtcgtgtttgacgtcgaaacaacaggtctgtcagctgtatac
gatacaatcattgaacttgcggctgttaaaatccgcgacggagaaatcatcgaccggttc
gaatcattcgctaatcctcaccaccgtttatcggcaacgaccatcaacttgacaggcatt
accgatgatatggtccgcaatgcgccggaagtgagtgaggtactgaaaaagttcaaggaa
tggtcaggtgactgtgtcctggttgcccacaatgcttctttcgatatgggatttctgaat
gtcggctataaaaagatcggcatgggtaaagcgcagaatccggttatcgatacacttgag
cttggccgcttcctgtatcctgatatgaaaaatcatcgattgaatacattagcgaagaaa
ttcgatattgaactaacacagcaccaccgtgccatctatgatgcagaagcgacagggtat
ctgttggtgaaaatgttaaaggatgcagcggaaaaaggattggaataccacgatcagctc
aatgacaatatgggccaggggaaagctttccagagagcgcgtccttatcatgctaccttg
ttggctaaaaacgaagtcggcatgaaaaacatcttcaagcttgtgtctatttcccatatt
gattacttttacagggtgccgcgaattccacgatcacttttaaataaacatcgtgaagga
attctgattggttctggatgcgacaagggtgaagttttcgaaggcatgatgcaaaaaggt
ccggaagaagtcgaagaagcagcgcagttctatgactatctggaagtccatccaaaggct
gtttatgctcacttgcttgaactggaattagtgcgggaccagaaggcacttgaggatatc
atcaacaatatcgtcaagcttggcgagaagctggacttgccggtagttgctacaggtaat
gtccactacttgaatgagaatgataaaatctaccgcaaaatcctgatcaactctcaggga
ggagcaaaccctcttaatcgtcatgagcttcctgatgtgcatttcaggacaacgaatgaa
atgctcgatgcttttaagtttctgggagaagaaaaggcgaaagaaattgttgtagaaaac
tctaacaagattgctgacatgatcgatgtcatcaagccaatcaaagatgacctttacaca
ccgaaaatcgagggcgcagatgaagaaatgcgcagcatgagctacggtatggcccgcagc
atttatggggatgaccttcctgaaatcgttgaggctcgtttggaaaaagaattgaagagt
atcatagacaatggttttgccgttatctatttgatttctcataaacttgttaaaaagtca
ctggatgatggctatctagtaggttcacgtggatcggtaggatcttcttttgtagcgacg
atgacggaaatcactgaggttaacccgctgccgccgcactatgtatgtccaaagtgcaaa
aaatcagagttcttcaatgatggatcagtcggttcaggttttgaccttcccgacaaggac
tgcccggaatgcggaattaaatataaaaaagacggacatgacataccgtttgaaaccttc
cttggtttcaaaggggacaaggtacccgatatcgacttgaacttctcgggtgagtaccag
ccgcgtgcccataattacacaaaagttctgtttggtgaggattatgtttaccgcgcggga
acaatcggtactgttgcggataagacggcctatggttatgtaaaaggataccagggtgac
aataatctgcagcttcgcggagcggaaatcgaccgtctggcatctggctgtaccggtgtg
aaacggacgactggccagcacccgggcggaatcatcgtagttcctgattacatggatatt
tttgatttttcgccaatccaatttcctgcagacagcagcacgtccgaatggaaaacaacc
cattttgatttccattcgattcacgacaacttgttgaagctggacattctcgggcacgat
gacccgacagtgatcaggatgcttcaggatttgagcggaatcgaccctaagacaattccg
actgatgatccagaagtcatgaaaattttcagcggaacagaatccctgggtgtgacagag
gaacaaattatgtccaagaccggttcacttggtattccggaattcggtactcgctttgtt
cgtcagatgcttgaggacacaaagccgacgacgttctctgaactcgtacagatttcaggt
ctttcacacggtacggatgtatggcttggaaatgcccaggaattgattcataacaatatt
tgtaaccttagcgaagtaatcggctgccgtgatgatatcatggtctacctgatctaccag
ggactggagccggcatttgcatttaagatcatggagtcggttcgtaagggtaaaggcttg
acggatgaaatggaagaagagatgcgcaagaataaagtgcctgaatggtacatcgattct
tgcaaaaagatcaagtacatgttcccgaaagcccacgccgctgcatacgttttgatggcc
gtgaggattgcctatttcaaagtccaccatccgctcatgtattacgcagcatacttcaca
gtcagggcggatgacttcgatgtcgacgcaatggtccgaggatccgagagcatccgggcg
gtgattgaagaaattagcgccaaggggcttgacgcttcgacaaaagagaaaaatctaatg
actgtaatggagctcgcacttgaaatgtgtgagcgaggctttggatttgcaaaagtagat
ctgtacaaatccagtgcgtcagagttcatcattgaaggcgataagctgataccgccattt
aatgcgatacctggactaggtacgaacgcggcgattaatatcgtcaaagcgcgtgaagaa
ggagaattcctgtccaaggaagacctgcagcagcgaggaaagatctccaagacgattctg
gaatacctcgacaaccatggctgcctggagggcatgccagatcagaaccaattgtcgtta
ttctaa
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