Mesobacillus jeotgali: FOF60_09125
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Entry
FOF60_09125 CDS
T08547
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mjo
Mesobacillus jeotgali
Pathway
mjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOF60_09125 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjo03019
]
FOF60_09125 (rny)
Messenger RNA biogenesis [BR:
mjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FOF60_09125 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
MctB
KH_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
UYZ24366
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Position
1847955..1849517
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AA seq
520 aa
AA seq
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MDLIISIISILLGLFVGAVVGYFYRKSVAEAKIAGAKNAAEQIVEDAKREAEAMKKEALL
EAKDENHKLRTEAEREIRERRNELQKQENRLLQKEENLDRKDESLNKRENLLEKKDDALS
KRQQHIEEMESKVDEMVRNQKTELERISGLTRDEAKSIILERTEQELAHDIALMIKENEN
RAKEESDKKAKEVLSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARLALDKLVQDGRIHPARIEEMVEKARREVDEHIR
EVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAQLSGLLAAELGEDETL
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
AAADALSAARPGARSEALENYIRRLERLEEISESYEGVEKSFAIQAGREIRIMVRPDQID
DLQAHRLARDIRKKIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatctaattatttcaatcatctccattttgcttggcctattcgtcggtgcagttgtt
ggctatttttatcgtaaatccgttgcggaagcaaaaattgcaggtgccaaaaacgccgca
gaacaaattgttgaagatgcgaagcgtgaagcagaggctatgaaaaaagaagccctgctg
gaggctaaggatgaaaatcacaagctgcgtactgaagcagagcgtgaaattcgtgaacga
agaaatgaactgcaaaaacaagaaaatcgtttattgcaaaaagaggagaatcttgatcgc
aaagatgagtcgttgaacaaacgcgagaatcttttagagaaaaaagatgacgctctttcc
aaaagacaacagcatattgaagagatggaaagcaaagtggacgagatggtacgaaatcag
aagactgaactagaacgcatctcgggcttaacgcgtgatgaggctaaatccatcattttg
gagcgtactgagcaagaacttgctcacgacattgcactaatgattaaggaaaacgaaaac
agggcgaaagaagaatccgataagaaagcgaaagaagtactttcactagccattcaaaga
tgtgcagcagaccatgttgctgaaacgactgtatcagtcgtaaatcttccgaatgatgaa
atgaaagggcgtattatcggtcgtgagggacggaatatccgcaccctggaaacgttgacg
ggaatcgatctcattattgatgacactccggaagcggttatcctttctggatttgaccct
atcagacgtgaaacagcccgtctagctctagacaagcttgtccaggatggacgtattcat
ccggctcgaattgaggaaatggttgagaaagcacgccgtgaagttgatgaacatattcgt
gaggttggggaacagactaccttcgaagtgggagtgcacggactgcatccagatcttatc
aagattcttggccgcttgaaatatcgtacaagctacggacagaatgtacttaaacattca
atggaagtagcccaattgtccggattgcttgccgcagaactaggtgaagatgaaactcta
gctcgccgcgcaggacttctgcatgatatcggtaaggcaattgaccatgaagtagaagga
agccacgttgaaatcggcgtggagcttgctactaagtataaggagcatccagttgttatc
aacagtattgcttctcaccatggtgatactgagccgacttcgatcattgcagtacttgtt
gctgctgctgatgcattatcagctgcaaggcctggtgcccgtagcgaagcgcttgaaaac
tatatccgccgtctcgaaaggcttgaagagatttctgaatcctatgaaggagtcgaaaaa
tcattcgctattcaggcgggtagagaaatcaggattatggttaggccagatcaaatcgat
gacttgcaggcacaccgcctcgcacgagatattcgtaagaaaatcgaggaagaactcgat
tatcctggacatatcaaggttacagtcatccgagagactcgggcagttgaatatgcaaaa
taa
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