Malassezia japonica: 85223832
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Entry
85223832 CDS
T11680
Symbol
SUB2, MJAP1_000183
Name
(RefSeq) RNA helicase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mjp Malassezia japonica
Pathway
mjp03013
Nucleocytoplasmic transport
mjp03015
mRNA surveillance pathway
mjp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
85223832 (SUB2)
09122 Translation
03013 Nucleocytoplasmic transport
85223832 (SUB2)
03015 mRNA surveillance pathway
85223832 (SUB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjp03019
]
85223832 (SUB2)
03041 Spliceosome [BR:
mjp03041
]
85223832 (SUB2)
Enzymes [BR:
mjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
85223832 (SUB2)
Messenger RNA biogenesis [BR:
mjp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
85223832 (SUB2)
Spliceosome [BR:
mjp03041
]
Complex C
Other components
EJC/TREX
85223832 (SUB2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
85223832 (SUB2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
BACON_2
Motif
Other DBs
NCBI-GeneID:
85223832
NCBI-ProteinID:
XP_060120138
UniProt:
A0AAF0EZV1
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All DBs
Position
1:<311584..>312917
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AA seq
432 aa
AA seq
DB search
MDNEDLIDYEEEVTVAPSTGTTTETTTTTTAAAGEEKDKKGSYVGIHSTGFRDFLLKPEL
LRAISDLGFEHPSEVQQECIPQSILGMDVLCQAKSGMGKTAVFVLATLQQIEPVDGEVSV
IVMCHTRELAYQIKNEYARFTKYMPEVRTAVVYGGTPIREDQAMLADKTKCPHIIVGTPG
RMNGLVRDKSLKGGEVKHFVLDECDKMLDNLEMRRDVQEIFRATPHHKQVMMFSATLSKE
IRPTCKKFMQNPLEIYVDDETKLTLHGLQQHYVRLEESAKNRKLNDLLDSLEFNQVIIFV
KSISRANQLDQLLRECNFPSISIHGGLPQDERIKRYQQFKNFEKRILVATDIFGRGIDVE
RVNVSISYDTPSDADSYLHRVGRAGRFGTKGLAITFVSSDEDAEVLKQIQSRFEVAVPEL
PESIEASSYMNA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgaggatcttattgattacgaggaggaagtgactgtggctccctccaccggc
accaccaccgagaccacgaccacgaccacggccgcggcgggtgaagaaaaagacaagaag
ggcagctacgtcggtatccactcgacgggtttccgtgactttttgctgaagcccgagctg
ctccgtgcgatcagtgaccttggtttcgagcacccctccgaggtgcagcaggagtgcatt
ccccagtcgattctcggcatggatgtgctttgccaggccaagtctggtatgggtaagacg
gccgtgtttgtgcttgccacgctgcagcagattgagccggtcgacggcgaggtgtcggtc
attgtcatgtgccacacgcgtgagctggcctaccagatcaagaacgagtacgctcgtttc
accaagtacatgcccgaggtgcgcaccgctgtcgtgtatggtggtacgcccatccgtgag
gatcaggcgatgcttgcggacaagaccaagtgcccccacattattgtcggcacgcccggt
cgtatgaacggtctggtgcgcgacaagtcgctcaagggtggtgaagtgaagcactttgtg
ctggacgagtgtgacaagatgctcgacaaccttgaaatgcgccgcgatgtgcaggagatc
ttccgcgcgacgccccaccacaagcaggtgatgatgttcagtgcgacgctctccaaggag
atccgccccacctgcaagaagttcatgcagaacccgctggagatctacgtcgacgatgag
acgaagctcacgctgcacggtctgcagcagcactacgtccgcctcgaggagtccgccaag
aaccgcaagctgaacgacctgctcgactcgctcgagttcaaccaggtgattatctttgtc
aagtcgatctcgcgtgcgaatcagcttgaccagctcctgcgcgagtgcaacttcccttcg
atctcgatccacggtggtctgccccaggacgagcgtatcaagcggtaccagcagttcaag
aactttgagaagcgtatccttgtcgcgaccgacatctttggccgtggtatcgatgtggag
cgtgtcaacgtctccatctcgtacgacacgccgtcggacgcggactcgtacctgcaccgt
gtcggccgtgcgggtcgtttcggtaccaagggtcttgccatcacctttgtgtccagcgat
gaggacgccgaggtgctcaagcagatccagagccgcttcgaggtggccgtcccagagctc
cccgagtcgatcgaggccagctcgtacatgaacgcataa
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