Malassezia japonica: 85225568
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Entry
85225568 CDS
T11680
Symbol
POL3, MJAP1_001919
Name
(RefSeq) DNA-directed DNA polymerase
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
mjp
Malassezia japonica
Pathway
mjp03030
DNA replication
mjp03410
Base excision repair
mjp03420
Nucleotide excision repair
mjp03430
Mismatch repair
mjp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
85225568 (POL3)
03410 Base excision repair
85225568 (POL3)
03420 Nucleotide excision repair
85225568 (POL3)
03430 Mismatch repair
85225568 (POL3)
03440 Homologous recombination
85225568 (POL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjp03032
]
85225568 (POL3)
03400 DNA repair and recombination proteins [BR:
mjp03400
]
85225568 (POL3)
Enzymes [BR:
mjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
85225568 (POL3)
DNA replication proteins [BR:
mjp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
85225568 (POL3)
DNA repair and recombination proteins [BR:
mjp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
85225568 (POL3)
MMR (mismatch excision repair)
DNA polymerase delta complex
85225568 (POL3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
DNA_pol_B_exo2
REV3_N
Motif
Other DBs
NCBI-GeneID:
85225568
NCBI-ProteinID:
XP_060121850
UniProt:
A0AAF0J9Z0
LinkDB
All DBs
Position
3:complement(<131413..>134702)
Genome browser
AA seq
1049 aa
AA seq
DB search
MADVDASNKKRKIDTEAGSFTDTLASLASNAGDESLVDPALAWKRPALEPIDANVDSIVF
QQIDVEEHQLPHAPPQIRMYGATNEGHSVLVHVHGFLPYFYVNAPRGFTTAACNDFKNYL
NTTFGNGVVADISMESKKNLMQYSGPEDIAFIKITASDLRSFPRVRDTVRSFERGEISFR
DLFVPGDSMVSFDNVAYTLRFMIDHQIVGMNWIELKPGHYTVRSNNASISRCQIEIDCNP
DAVISHAPTGEWLKMAPLRILSFDIECAGRKGIFPDPNIDPVIQIANMVTRQGESTPFVK
NIFTLGTCSHIMGCHVMSFEDEVEMLEAWTDFIQRVDPDVVIGYNTSNFDFPYLMDRAKA
LKASAFPYLGRERNTRTEVKDTHFSSKAYGTRDSKNTELQGRLQLDMLQVMQRDYKLRSY
SLNSVSFEFLKEQKEDVHHSLITELQNSGPEARRRLAVYCLKDAYLPQRLLDKLMCFINY
TEMARVTGVPFNYLLSRGQQIKVVSQLFRKAREDGYLIPTYKGDGGDEQYEGATVLEPKQ
GYYDKPVATLDFASLYPSIMMAHNLCYTTLLDKRTIERMNLKQDEDYIVTPNNNYFVKSS
VRKGLLPTVLEALLAARKKAKADLKKETDPFRRAVLDGRQLALKISANSVYGFTGATVGR
LPCLEISMSVTAFGRQMIEETKRQVESHYTVANGYEHNAVVIYGDTDSVMVKFGVAELEK
AMELGAEAAERVSQVFVKPIRLEFEKVYFPYLLINKKRYAGLYWTQPDKYDKMDTKGIET
VRRDNCRLVRTVIETCLKKMLIDRDVQGAEHYAKQVIADLLQNKVDMSMLVISKALAKTD
YAAKQAHVELAERMRKRDAGSAPALGDRVAYVIVKGSKGSAAYEKSEDPLYALEHNIPID
TRYYLDNQLSKPLMRIFEPIMGSRANSLLAGEHTRVLQVATSNVGALMKFAVKTVQCLGC
RTPLKDQNAAVCKNCKPREAELYFEKLMRASSMEVEFSRLWTCCQRCQGSLSQDVLCSNQ
DCPIFFKRKRAQKDAEDASRVIQRFDTAW
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgacgcaagcaataaaaagcgcaagatcgacacagaggcggggtctttt
acggacacgctcgcgagcctcgcgtcgaacgcgggagacgagagtttggtcgaccctgcc
ttggcctggaagcgccccgcgctcgagccgatcgacgcgaatgtcgacagcattgtattt
caacagattgatgtcgaggaacaccagctgcctcacgccccgccgcaaatccgcatgtac
ggcgcgacgaatgaggggcattcggtcttggttcacgtccacggattcttgccctacttt
tacgtgaatgctcctcgcggatttacgacggctgcgtgcaacgactttaagaactatctg
aataccacttttggcaacggcgtcgtggccgacattagcatggagagcaaaaagaacctc
atgcagtactcggggccggaggacattgctttcatcaagattacggcgtcggatctgcgc
agctttccgcgtgtacgagataccgtacggtcgtttgagcgtggcgagatttccttccgc
gacttgttcgtgccgggcgactcgatggtgtcgtttgacaatgtcgcctacacgctgcgg
tttatgatcgaccatcagatcgtcggcatgaattggatcgagctcaagccggggcactac
acagtgcgcagcaacaatgcgagcatttcgcgctgccaaatcgagattgactgcaacccc
gacgcggtgatctctcacgcgccgaccggcgaatggctcaagatggcaccgctgcgtatc
ctgagtttcgatatcgagtgcgcaggccgcaagggcatctttccggatcccaacatcgac
cctgtgatccagatcgcgaatatggtgacgcgccagggcgaatctacgccgtttgtcaag
aatatatttacgctgggcacctgctcacacattatggggtgccatgtgatgtcgttcgaa
gacgaggtcgagatgcttgaagcgtggaccgactttatccagcgcgtcgatccggatgtg
gtgatcggatacaacacatccaacttcgatttcccgtacctcatggaccgcgccaaggcg
ctcaaggcgtcggcttttccgtacctgggccgcgagcggaatacacgtaccgaggtcaag
gatacacacttttcttccaaagcgtacggaacccgtgactccaagaacacggagctgcaa
ggtcgtctgcaactcgacatgctacaggtcatgcagcgtgactacaagctgcgcagctac
tcgctaaactcggtctcgttcgagttcctcaaggagcagaaggaggacgtgcatcactcg
ctcatcaccgagctgcaaaactcggggcctgaggcgcgccgccgcttggctgtgtactgt
ctcaaggatgcctaccttccccagcgcctgctcgacaaactcatgtgcttcatcaactac
accgagatggctcgtgtgaccggtgtgccgttcaactacctgctcagccgtggtcaacaa
atcaaggtcgtgtcgcagctcttccgcaaggcgcgtgaagatggttatctcattccgacg
tacaagggcgacggtggggacgagcagtacgagggtgcgactgtgctggagcccaagcag
ggctactacgacaagcccgttgcgacgctcgactttgcatcgctgtatccctcgatcatg
atggcacacaatctatgctacacgacactgctggacaagcgcaccatcgaacgcatgaac
ctcaagcaggatgaagactacatcgtgacgccgaacaacaactactttgtcaagtcgtcc
gttcgcaaaggtctgcttccgactgtcctggaagccctgcttgctgcgcgtaaaaaggcc
aaggcggacttgaagaaggagacggatccttttcgccgcgccgtgctcgatggtcgtcag
ctcgcgctcaagatcagtgccaactccgtgtacggtttcacgggtgcaacggtcggacgc
ctaccgtgtctcgagatctcgatgagcgtcactgcgtttggtcgtcagatgattgaagag
accaagcgccaggtcgagtcgcattacactgtggcgaatggctatgagcacaatgccgtg
gtgatttacggtgacacggactcggtcatggttaagtttggtgttgcagagctggaaaag
gcgatggagctcggcgcagaggctgccgagcgtgtgtcgcaggtctttgtgaagccgatc
cggctcgagttcgaaaaggtctatttcccgtaccttttgatcaacaagaagcgctacgcc
ggcctgtactggacgcaacccgacaagtacgacaagatggataccaagggtatcgagacg
gtgcgccgtgacaactgccgccttgtgcgcacggtgattgagacgtgcctaaagaaaatg
ctcatcgaccgcgacgtgcagggtgcagaacattacgcgaagcaagtcattgcggacctc
ttgcagaacaaggtcgacatgtcgatgcttgtcatttctaaggcgctggccaaaacggac
tatgcagccaaacaggcacatgtcgaacttgcggagcgtatgcgcaagcgcgatgccggc
tcggcgccggcgctcggtgaccgtgtcgcgtacgtgattgtcaaaggcagcaaaggcagt
gccgcttacgaaaagtccgaggaccctctctacgcactcgagcacaacatcccaatcgat
acacgctactacctcgacaaccagctgtcgaagcccttgatgcgcatctttgagccgatc
atgggttcgcgcgcaaactcgctgttggccggcgaacacacgcgtgtgctgcaagtggcc
acctcaaacgtcggtgcactgatgaaatttgccgtcaagacggtgcagtgccttggctgc
cgcacgccgctcaaggaccagaacgcggcggtgtgcaagaactgcaagccgcgcgaagcc
gagctgtactttgagaaactcatgcgtgcgtcgtcgatggaagtcgagtttagccgtctg
tggacctgctgtcagcggtgccagggctcgctctcacaggacgtcctctgctcgaaccag
gactgccctatctttttcaagcggaagcgtgcgcagaaggatgccgaggatgcgagtcgt
gtgattcagcgctttgatacagcgtggtaa
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integrated database retrieval system
