KEGG   Malassezia japonica: 85226787
Entry
85226787          CDS       T11680                                 
Symbol
SMD2, MJAP1_003136
Name
(RefSeq) mRNA splicing protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
mjp  Malassezia japonica
Pathway
mjp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mjp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    85226787 (SMD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mjp03041]
    85226787 (SMD2)
   03032 DNA replication proteins [BR:mjp03032]
    85226787 (SMD2)
Spliceosome [BR:mjp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    85226787 (SMD2)
  U2 snRNP components
    85226787 (SMD2)
 Complex B
  U1 snRNP components
    85226787 (SMD2)
  U4/U6.U5 tri-snRNP components
    85226787 (SMD2)
 Complex C
  U2 snRNP components
    85226787 (SMD2)
DNA replication proteins [BR:mjp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     85226787 (SMD2)
SSDB
Motif
Pfam: LSM CNN1_N Hfq bPH_12 Met_gamma_lyase
Other DBs
NCBI-GeneID: 85226787
NCBI-ProteinID: XP_060123047
UniProt: A0AAF0EZZ2
LinkDB
Position
5:<705969..>706395
AA seq 105 aa
MSQYVNVPKSDLDEAQIRELEQYEISQGPLSVLQQSVRNHTQVLISLRNNKKLLARVKAF
DRHSNMVLENVKEMWTEVKPVNKDRFISKMFLRGDSVVLVLRNIA
NT seq 318 nt   +upstreamnt  +downstreamnt
atgagtcaatacgtcaacgtgcccaagtccgatctggacgaggcgcagattcgcgagctc
gagcagtacgagatctctcaggggccgctgtctgtgctccagcagtcggtgcgcaaccat
acccaggtcctgatctcgctgcggaacaacaaaaagctccttgcgcgcgtcaaggcgttc
gaccgtcactcgaatatggtgctggagaacgtgaaggagatgtggacggaggtgaagccg
gtgaacaaggaccgctttatctcgaaaatgtttttgcgtggcgactcggtggtgctggtc
ttgcgcaacattgcgtaa

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