Malassezia japonica: 85226787
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Entry
85226787 CDS
T11680
Symbol
SMD2, MJAP1_003136
Name
(RefSeq) mRNA splicing protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
mjp Malassezia japonica
Pathway
mjp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
85226787 (SMD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjp03041
]
85226787 (SMD2)
03032 DNA replication proteins [BR:
mjp03032
]
85226787 (SMD2)
Spliceosome [BR:
mjp03041
]
Complex A
U1 snRNP components
Sm proteins
85226787 (SMD2)
U2 snRNP components
85226787 (SMD2)
Complex B
U1 snRNP components
85226787 (SMD2)
U4/U6.U5 tri-snRNP components
85226787 (SMD2)
Complex C
U2 snRNP components
85226787 (SMD2)
DNA replication proteins [BR:
mjp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
85226787 (SMD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
CNN1_N
Hfq
bPH_12
Met_gamma_lyase
Motif
Other DBs
NCBI-GeneID:
85226787
NCBI-ProteinID:
XP_060123047
UniProt:
A0AAF0EZZ2
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All DBs
Position
5:<705969..>706395
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AA seq
105 aa
AA seq
DB search
MSQYVNVPKSDLDEAQIRELEQYEISQGPLSVLQQSVRNHTQVLISLRNNKKLLARVKAF
DRHSNMVLENVKEMWTEVKPVNKDRFISKMFLRGDSVVLVLRNIA
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatacgtcaacgtgcccaagtccgatctggacgaggcgcagattcgcgagctc
gagcagtacgagatctctcaggggccgctgtctgtgctccagcagtcggtgcgcaaccat
acccaggtcctgatctcgctgcggaacaacaaaaagctccttgcgcgcgtcaaggcgttc
gaccgtcactcgaatatggtgctggagaacgtgaaggagatgtggacggaggtgaagccg
gtgaacaaggaccgctttatctcgaaaatgtttttgcgtggcgactcggtggtgctggtc
ttgcgcaacattgcgtaa
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