KEGG   Mesorhizobium jarvisii: EB229_04470
Entry
EB229_04470       CDS       T06715                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mjr  Mesorhizobium jarvisii
Pathway
mjr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mjr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EB229_04470 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mjr03021]
    EB229_04470 (rho)
   03019 Messenger RNA biogenesis [BR:mjr03019]
    EB229_04470 (rho)
Transcription machinery [BR:mjr03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     EB229_04470 (rho)
Messenger RNA biogenesis [BR:mjr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EB229_04470 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 OB_RNB AAA_22 S1CSD-TOTE-2 NACHT DnaB_C
Other DBs
NCBI-ProteinID: QKC61640
LinkDB
Position
912505..913770
AA seq 421 aa
MQEMKLTEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKKLAAQDVEIIGDGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVN
TINFDDPEKIRHKIHFDNLTPLYPTSRLKMEMEVPTSKDISPRVIDLVAPLGKGQRALIV
AQPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIYPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNADFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaacttaccgaattcaagaacaagaagccgccagagctgatcgcttat
gccgaatcgctcgaggtcgagaacgccagcgtcatgcgcaaacaggagctgatgttcgcg
atcctgaagaagctggccgcccaggacgtcgagatcatcggcgatggcgtggtcgaagtg
cttcaggacgggttcggtttcctgcgctcggccaacgccaactatctgccaggtcccgac
gacatctatatttcgccgtcgcagatccggcgcttttcgctgaagaccggcgacacggtc
gaaggaccgatccgcagcccgaaagagggcgagcgctatttcgcgctgctcaaggtcaac
accatcaatttcgacgatcccgaaaagatccgccataagatccatttcgacaatctgacg
ccgctctatccgacctcgcggctgaagatggaaatggaggttccgacctccaaggacatc
tcgccgcgcgtcatcgacctggtggcgccgctcggcaagggccagcgcgctttgatcgtc
gcgcagccgcgcaccggcaagacggtgctgctgcagaacatcgcccattccatcaccacc
aatcacccggaatgctatctgatcgtgcttctgatcgacgagcggccggaagaagtgacc
gacatgcagcgctcggtgaagggcgaggtcgtctcctcgaccttcgacgaaccggcggtg
cgccacgtccaggtcgccgaaatggtgatcgaaaaagccaagcgcctggtcgaacatggc
cgcgacgtcgtcatcctgctcgattccatcacccgcctcggccgcgcctacaacaccgtc
gtgccgtcatccggcaaggtgctgaccggcggtgtcgacgccaacgcgctgcagcgcccg
aagcgcttcttcggcgccgcgcgtaacatcgaggaaggcggttcgctgaccatcatcgcc
accgcgctgatcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggcaattcggaaatcgtgctcgaccgcaaggtcgccgacaagcgcatctatccggcc
atggacatcctgaagtccggtacccgcaaggaagacctgctggtgccgcgtcaggacctg
cagaagatcttcgtgctgcgccgcatcctggcgccgatgggaaccaccgacgcgatcgag
ttcctcatcgacaagctgaagcagaccaagaccaatgcggatttcttcgattcgatgaat
acgtaa

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