Mesorhizobium jarvisii: EB229_11550
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Entry
EB229_11550 CDS
T06715
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mjr
Mesorhizobium jarvisii
Pathway
mjr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mjr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EB229_11550 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjr03400
]
EB229_11550 (uvrB)
DNA repair and recombination proteins [BR:
mjr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EB229_11550 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EB229_11550 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
SWI2_SNF2
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
QKC62864
LinkDB
All DBs
Position
complement(2302185..2305343)
Genome browser
AA seq
1052 aa
AA seq
DB search
MAKSPEKRTPPTANDDRAAPKRRSPLTDFLDASEPLHRGGFAEMPQAELSGTPLTGSIAD
WAEQIEQEAEREGRQAGKGDGGKAPKAAKKIPERSTSPGRTARGTSMGGAATARERTAAG
LNPVAGLDISLEEAETMTSSGVTATVAALSALIESGNPLHKDGVLWTPHRPARPEKSEGG
IAIKMVSDFEPAGDQPTAIKDLVEGVDNNDRTQVLLGVTGSGKTFTMAKVIEETQRPALI
LAPNKTLAAQLYSEFKKFFPDNAVEYFVSYYDYYQPEAYVPRTDTFIEKESSINEQIDRM
RHSATRSLLERDDVIIVASVSCIYGIGSVETYTAMTFQMQIGDRLDQRALLADLVAQQYK
RQDINFVRGSFRVRGDTIEIFPAHLEDRAWRISMFGDEIEQITEFDPLTGQKTGELKSVK
IYANSHYVTPRPTLNQAIKSIKEELKQRLVELERAGRLLEAQRLEQRTRFDLEMLEATGS
CAGIENYSRYLTGRQPGDPPPTLFEYIPDNALVFIDESHVTVPQIGGMYRGDFRRKATLA
EYGFRLPSCMDNRPLRFEEWDAMRPLSVAVSATPGGWEMEQSGGVFAEQVIRPTGLIDPP
VEVRPAKSQVDDVVGEIRETTKAGYRTLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDT
LERIEILRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRA
ARNVDGKVILYADQVTGSMERAMAETNRRREKQMEWNAANGITPESVKSRISDILDSVYE
KDHVRADISQFTDSAGAMMGNNLKAHLDAMEKQMRDAAANLDFEKAARIRDEIKRLREME
LSISEDPLAKYADMESPVSGREKGKHNKGVAKHRTAEEQERFRKLDEARAAEEAARAARP
NLFRKPDLDEMGADSAVPVKKPLFAKPSIDDMGPGTDMPTPAGAVSRSLFKKQSASEAHG
SDFGIPGEPVKPLFKKNSLDEMTVRRTEKPVEGKVPAKPQPISPPVGAGRIDAKDRDEKP
IIRQRTGIGSYEDPGDARREKRRPGKTGRPGK
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatcccccgagaaaagaacgccgccgacggcgaatgacgaccgcgccgcgccg
aagcggcgcagcccgctgaccgatttcctcgacgcctcggaaccgctgcacagaggcggc
ttcgccgagatgccgcaggccgaactgtcgggcacgccgctgaccggttcgatcgccgac
tgggccgagcagatcgagcaggaggcggagcgcgaagggcgccaggccggcaagggcgac
ggcggcaaagcgccgaaggcggcgaaaaagattcccgagcgctcgacctcccccggccgc
accgcgcgcggtacctcgatgggtggcgcggcgacagccagggagcgcaccgcagccggc
ctcaatccggtcgccggcctcgacatctcgctggaagaagccgagacgatgacctccagt
ggcgtcaccgccacggtggccgccctgtcggcgctgatcgaatccggcaatccgctgcac
aaggacggcgtgttgtggacgccgcaccgccctgcccggccggaaaagtcggaaggcggc
atcgccatcaagatggtgtcggacttcgagccggcgggcgaccagccgaccgccatcaag
gaccttgtcgaaggcgtcgacaacaatgaccgcacccaggtgcttctcggcgtcaccggc
tcgggaaaaaccttcaccatggccaaggtgatcgaggagacgcagcgtcctgccctgatc
ctggcgccgaacaagacgctggccgcgcagctctattccgagttcaagaaattcttcccc
gacaatgcggtggagtatttcgtctcctactacgactactaccagccggaagcctatgtt
ccgcgcaccgacaccttcatcgagaaggaatcctcgatcaacgaacagatcgaccgcatg
cgccattcggcgacgcgctcgctgctcgaacgcgacgacgtcatcatcgtcgcctcggtg
tcctgcatctacggtatcggttcggtcgagacctatacggcgatgaccttccagatgcag
atcggcgaccggctcgaccagcgcgctctgctcgccgacctcgtcgcccagcaatacaag
cggcaggacatcaatttcgtgcgcggctcgttccgcgtgcgcggcgacacgatcgagatc
ttcccggcccaccttgaagaccgcgcctggcggatctcgatgttcggcgacgagatcgag
cagatcaccgaattcgacccgctgaccggccagaagaccggcgagctgaagagcgtcaag
atctacgccaactcccactatgtgacgccgcgcccgacgctgaaccaagcgatcaagtcg
atcaaggaagagctcaagcagcgtctggtcgaactggagcgcgccggccgcctgctggaa
gcgcagcggctggaacagcgcacccgcttcgacctcgaaatgctggaagccaccggctcc
tgcgccggcatcgagaactattcgcgctatctcaccggccgccagccgggcgatccgccg
ccgaccttgttcgaatacattcccgacaatgcgctggtgttcatcgacgaaagccacgtc
accgtcccgcagatcggcggcatgtatcgcggcgacttccggcgcaaggcgacgttggcc
gaatatggcttccgtctgccctcctgcatggacaaccggccgctgcgctttgaggaatgg
gacgccatgcgtccgctctccgtcgccgtttcggcgacgcccggcggctgggaaatggaa
cagtccggcggcgtcttcgccgaacaggttatccgcccgaccggcctgatcgacccgccg
gtcgaggtgcgcccggccaaaagccaggtcgacgatgtcgtcggcgagatccgcgaaacg
accaaggccggctaccgcacgctggtcacggtgctgaccaagcgcatggccgaggacctg
accgaatacctgcacgaacaaggcgtgcgcgtacgctacatgcactccgacatcgacacg
ctggagcgcatcgagatcctgcgcgatctgcgcctcggcgctttcgacgtgctggtcggc
atcaaccttttgcgcgaaggcctggacattcccgaatgcggcttcgtcgccattctcgat
gccgacaaggaagggttcctgcgctcggaaacctcgctgatccagaccatcggccgcgct
gcccgtaacgttgacggcaaggtcatcctctatgccgaccaggtcaccggttcgatggag
cgggcgatggccgagaccaaccgccgccgcgaaaagcagatggaatggaacgccgccaat
ggcatcacgccggaatcggtgaagtcgcgcatctccgacattctcgactcggtctacgag
aaggaccatgtccgcgccgacatctcgcagttcaccgacagcgccggcgccatgatgggc
aataacctcaaggcgcatctcgacgcgatggagaaacagatgcgcgacgccgccgccaat
ctcgacttcgagaaggctgcccgcatccgcgacgagatcaagcggctgcgcgagatggaa
ctgtccatctccgaagacccgctggccaaatacgccgacatggaaagcccggtctcgggc
cgcgaaaagggcaagcacaacaagggtgtggccaagcatcgcacggcggaggaacaggag
cgtttccgcaagctcgacgaggcacgtgccgccgaagaggccgccagagctgcccggccc
aaccttttccgcaagcctgatctcgacgagatgggtgccgacagcgccgtgccggtgaag
aaaccgctgttcgccaaaccctcgatcgacgacatggggcctggcaccgacatgccgaca
ccggcaggtgcggtgtcgcgctcgctgttcaagaagcagtcggcgtccgaagcgcacggc
tccgacttcggcattcccggcgagccggtcaagccgctgttcaagaagaactcgctcgac
gagatgaccgtgcggcgtacggaaaaaccggtcgagggaaaagtgccggcgaagccccag
ccgatctccccccctgtgggagccggcaggatagacgcgaaggatcgcgacgaaaaaccg
atcatccgccagcgcaccggcatcggctcctacgaggacccaggcgacgcgcgtcgggag
aagcgccggcccgggaaaacgggcaggccggggaagtag
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