Mesorhizobium jarvisii: EB229_18900
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Entry
EB229_18900 CDS
T06715
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mjr
Mesorhizobium jarvisii
Pathway
mjr03420
Nucleotide excision repair
mjr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mjr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EB229_18900
03430 Mismatch repair
EB229_18900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjr03400
]
EB229_18900
Enzymes [BR:
mjr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EB229_18900
DNA repair and recombination proteins [BR:
mjr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EB229_18900
MMR (mismatch excision repair)
Other MMR factors
EB229_18900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QKC64128
LinkDB
All DBs
Position
complement(3796603..3799260)
Genome browser
AA seq
885 aa
AA seq
DB search
MSGFSEDMPFFDEPNARPTAPSGIAARAMAARGGQNSAPDYLKGLNPEQRLAVETTEGPV
LVLAGAGTGKTRVLTTRIAHILATGKAFPSQILAVTFTNKAAREMKQRIGILIGEGNVEG
MPWLGTFHSIGVKLLRRHAELAGLRSDFTILDTDDVVRLIKQLIQAEGLDDKRWPAKQFA
QMIDGWKNKGQGPADIAEGDARSFANGKGRELYKAYQERLQTLNACDFGDLLCHPIRIFR
ANPDVLKDYHRRFKYILVDEYQDTNTAQYMWLRLLAQRPDAGRAATSTDLRSSEGRKPDR
ASAGQVAPAEASERSSHAAVSENKVNICCVGDDDQSIYGWRGAEVDNILRFDKDFPGATI
IRLERNYRSTAHILGAASHLIAHNEGRFGKTLFTDRNDPEDGKVNVHAAWDSEEEARAIG
ETIEAYQRQKHNLNDMAILVRASFQMRAFEDRFITLGLNYRVIGGPRFYERMEIRDALAF
FRVVANSGDDLAFERIVNVPKRGLGEATIRQIHDTARALRIPMLEAAGNLAESDELKPKP
RAALREVAANFERWQKALETKPHTELAETILEESGYTDMWKNDRSAEAPGRLENLKELIR
SMEEYESLRSFLEHVALVMDAEQNAGQDAVSIMTLHSAKGLEFETVFLPGWEEGLFPHQR
ALDEGGRSGLEEERRLAYVGLTRAKKNLHIWFVSNRQIHGLWQSTIPSRFLEELPESHVE
IAESGNSYGGYGNPYGGGSFASGRGGRQNPYGASRFDSVGANAEKSGAFSNTYSTPGWQR
AQANRTEATDRNWGTRSGHQVERIGYGETDSGYGAGRTSVKGRTIDGELVAKSVADKPSP
FSVGDRVFHQKFGNGNISAIEGNKLTIDFDKAGQKRVLDGFVAAV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcttttccgaagacatgccctttttcgacgaacccaatgcgcggccgacggcc
ccgtcgggcattgccgcgcgcgccatggctgcccgcggcggccagaacagcgcgcctgat
tatctcaaggggctgaatccggaacaaaggctggcggtggagaccaccgaaggcccggtt
ctggtgctggccggcgccggcaccggcaagacgcgtgtgctcaccacccgcatcgcccac
atccttgccaccggcaaggccttcccctcgcagatcctcgccgtgaccttcaccaacaag
gccgcgcgcgagatgaagcagcgcatcggcatcctgatcggcgaaggcaatgtcgagggc
atgccctggctcggcaccttccattcgatcggcgtgaagctgttgcgccgtcatgccgag
cttgccggcttgcgttccgacttcaccatcctcgacaccgacgacgtcgtgcggctgatc
aagcagctgatccaggccgagggcctcgacgacaagcgctggccggccaagcagttcgcc
cagatgatcgatggctggaagaacaaggggcaaggtccggccgatatcgcagagggcgac
gcgcgcagcttcgccaacggcaagggccgcgaactctacaaggcctatcaggagcggttg
cagacgctgaacgcctgcgacttcggcgacctgctctgccaccccatccgcatcttccgc
gccaatccggacgtgctgaaggactatcaccggcgcttcaaatacatcctcgtcgacgag
taccaggacaccaacaccgcccagtacatgtggctgcgcctgctggcgcagcggccggac
gccgggcgtgcggcaacgtcgacggatttgcgatcgtccgaaggccgcaagcccgaccgg
gcgtcggccggccaggtcgcccccgcggaggccagcgagcgaagctcgcatgcggccgtg
agcgaaaacaaagtcaatatttgctgcgtcggcgacgacgaccagtccatctatggctgg
cgcggcgccgaggtcgacaacatcctgcgcttcgacaaggatttcccgggcgccaccatc
atcaggctggagcgcaactaccgctcgaccgcgcacatccttggcgctgcctcccacctc
atcgcccacaatgagggccgcttcggcaagacgctgttcaccgaccgcaacgaccccgag
gacggcaaggtcaatgtccacgccgcatgggattccgaggaggaggcccgcgccatcggc
gagaccatcgaggcctatcagcggcagaagcacaatctcaacgacatggcgatcctggtg
cgcgcgtccttccagatgcgcgccttcgaggaccgcttcatcacgctcggcctcaactac
cgcgtcatcggcggcccgcgcttctacgagcgcatggaaatccgcgacgcgctggccttc
ttccgcgtcgttgccaacagcggcgacgacctcgccttcgagcgcatcgtcaacgtgccg
aagcgcggcctgggcgaagccaccatccgccagatccacgatacggcgcgcgcgctgcgc
atcccgatgctggaggccgccggcaatctcgccgagagcgacgagttgaagccgaaacca
cgcgccgcgttgcgtgaagtggccgccaatttcgagcgctggcagaaggcgctggaaacc
aagccgcacaccgagctcgccgagaccattctcgaggagagcggctacaccgacatgtgg
aagaacgaccgctcggccgaagcgccgggccggctggagaacctcaaggaactgatccgc
tcgatggaggagtacgagtcgctgcgctccttcctcgagcatgtcgcgctggtcatggat
gccgagcagaatgccgggcaggacgccgtctccatcatgacgctgcattctgccaaaggc
ctcgaattcgagacggtttttctgcccggctgggaggaaggcctgttcccccaccagcgc
gcgctcgatgaaggcggccgctccgggctggaggaagagcgccggctggcctatgtcggt
ctcacccgggccaagaagaacctgcatatctggttcgtctccaaccgccagatccatggg
ctctggcaatcgaccatcccgtcgcgcttcctcgaggaactgccggaatcccatgtcgag
atcgccgaaagcggcaattcctatggcggctacggcaacccctatggcggcggctccttc
gcctccggccgtggtggccggcagaacccctacggcgcctcgcgcttcgacagtgtcggc
gccaacgccgaaaaatccggcgctttctccaacacctattcgacgcctggctggcagcgc
gcgcaggccaaccgcaccgaagcgaccgaccgcaactggggcacgcgctccggccaccag
gtcgagcgcatcggctatggcgagaccgacagcggttacggcgccggccgcacgagcgta
aagggccgcaccatcgacggcgagctggtcgccaaatccgtcgccgacaagccgtcgcct
ttcagcgtcggcgaccgcgtcttccaccagaaattcggcaacggcaacatctcggccatc
gagggcaacaagctgaccatcgacttcgacaaggccggccagaaacgcgtgctggacggg
ttcgtcgcggcggtgtga
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