Mesorhizobium jarvisii: EB229_21285
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Entry
EB229_21285 CDS
T06715
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mjr
Mesorhizobium jarvisii
Pathway
mjr03030
DNA replication
mjr03430
Mismatch repair
mjr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mjr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EB229_21285
03430 Mismatch repair
EB229_21285
03440 Homologous recombination
EB229_21285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjr03032
]
EB229_21285
03400 DNA repair and recombination proteins [BR:
mjr03400
]
EB229_21285
Enzymes [BR:
mjr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EB229_21285
DNA replication proteins [BR:
mjr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EB229_21285
DNA repair and recombination proteins [BR:
mjr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EB229_21285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QKC64535
LinkDB
All DBs
Position
4300480..4304007
Genome browser
AA seq
1175 aa
AA seq
DB search
MADDKLPRDPLKREAAIAAARPEVPARPFVHLRVHSAYSLLEGALQLGKIVGHAVKDEAP
AIAVTDTNNLFGALEFAQKAVKEGIQPIIGCQIALAFSGENSDGQRDRRRQGPEMRPVVL
LAATEAGYSNLVRLVSRVYLETPPGEAVHLTTEMLEGKADGLICLSGGPRGPIGNALKED
RRDLAEVRLLTLKAMFGDRLYVELDRVAGYDRVIEHQTIDLAYAHELPLVATNEAFFSSR
DDYEAHDALIAIAEGSVVAVDTRRRLSPDNFLRSQADMAKLFADLPEAIDNTVEIAQRCS
YYPKTRSPILPRFTGGDASDKDAAEKAEAAELARQAREGLDARLALHGPTPGYTVEQYRE
RLEFELGIIEKMKFPGYFLIVADFIKWAKAQGIPVGPGRGSGAGSLVAYSTTITDIDPLR
FSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVQQKYGRDQVGQIITFGTLQARAVLR
DVGRVLQMPYGQVDKLSKMVPQNPANPVKLADAIANEPRFAEEAEKEPIVQTLLDMAQKL
EGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKT
LTVLETAVKLIRRRGIDIDLATIPLDDPETYAMLSRGEVVGVFQVESAGMRKALIGMRPD
CIEDIIALVALYRPGPMENIPTYNARKHGEEEMASIHPKIDHLVKETQGVIVYQEQVMQI
AQELSGYSLGEADLLRRAMGKKIRAEMDKQRERFVSGAVERGVSKPQADFIFDLLAKFAD
YGFNKSHAAAYAVVSYQTAYLKAHYPVEFLAASMTLDMGNTDKLADFRQDALRLGIEVLA
PSVMTSFRPFEVGENRIYYSMAALKGVGDAAVEHIVAVRGEKPFKNLADFCERVDPKIVG
KRVFESLIMAGALDCFGHDRAQMMAGVERMMGLASLAQQNAVSGQADIFGASLGAQSQAL
NLPATDPWLAADRLHREFQVVGFYLSAHPLDEYKAALQKMRVQNWAEFSAAVKRGASAGR
LAGTVTSKQERKTRTGNKMGVVAFSDTSGQYEAVLFSEALAQYRDLLEAGRSVVITVAAE
DRPEGVNLRINSVQSLEEEASRIQKALRIFVRNDGPASIIQSQLTQRGESQVSIIVIKEE
AQGEVEIALQGGYRVSPQIASAMRAVPGVVEVELV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacaaactcccacgcgaccccctgaagcgcgaagccgcgatagcggcggcg
cggccggaggtgccggcgcggccgttcgtgcatctgcgcgtgcattcggcctattcgctg
ctcgagggcgcgctccaactcggcaagatcgtcggccatgccgtgaaggacgaggcgccg
gcgatcgccgtcaccgacaccaacaatctgttcggcgcgctcgaattcgcgcagaaggcg
gtgaaggagggcatccaaccgatcatcggctgccagatcgcgctcgccttttccggcgaa
aacagcgacggccagcgggatcgccggcggcaaggcccggaaatgcggccggtcgttctg
ctcgccgcgaccgaagccggttattccaacctggtcaggctggtcagccgcgtctatctg
gaaacaccgcccggcgaggcggtgcatctgacgaccgagatgctggagggaaaggccgat
gggctgatctgcctcagcggcgggccacgcggcccgatcggcaatgccttgaaggaggat
cgccgcgatctggccgaggttcggcttttgacgctcaaggcgatgttcggcgaccggctc
tatgtcgaattggaccgggtcgcgggctatgaccgggtcatcgaacatcagacgatcgat
ctcgcctatgcgcacgaacttccgcttgtcgccaccaacgaggcgtttttctcttcacgc
gacgattatgaggcgcatgacgcgctgatcgccatcgccgagggctccgttgtcgctgtc
gatacccgccgccggttgtcgccggacaatttcctgcgcagccaggccgacatggcaaag
ctgttcgccgacctgccggaagcgatcgacaatacggtcgagatcgcccagcgctgttcc
tattatccgaaaacccgcagcccgatcctgccacgcttcactggcggcgatgcctccgac
aaggatgcggccgaaaaggccgaggccgcggagctcgcccgccaggcgcgtgaggggctc
gacgcacggctcgccctgcacggaccgactccgggctacacggtcgagcagtatcgcgaa
cggctggaattcgagctcggcatcatcgagaagatgaaattccccggctacttcctgatc
gttgccgacttcatcaaatgggccaaggcgcaaggcattccggttggaccgggccgtggt
tcgggcgccgggtcgctggtcgcctattcgacgaccatcaccgacatcgatccgctgcgc
ttctcgctgctgttcgagcgcttcctcaatcccgaccgcgtgtcgatgcccgacttcgac
atcgacttctgccaggatcgccgcgaagaggtgatccgctacgtccagcagaaatacggc
cgcgaccaggtcggccagatcatcaccttcggtacactgcaggcccgcgccgtgctgcgc
gatgtcggccgcgtgctgcagatgccctatggccaggtcgacaagctgtccaaaatggtg
ccgcagaaccctgccaatccggtcaagctggcggacgccattgccaatgagccgcgcttt
gccgaagaggccgagaaggagccgatcgtccagacgctgctcgacatggctcagaagctg
gaaggtctttaccgccacgcttctacgcacgccgccggcatcgtcatcggcgaccggcct
ttgtcggaactggtgccgatgtaccgcgatccgcgctcggacatgccggtcacccagttc
aacatgaaatatgtcgagcaggccgggctggtgaagttcgacttcctcggcctgaagacg
ctgaccgtgctggagacggcggtcaagctgatccgccggcgcggtatcgacatcgacctg
gcgacgatcccgctcgacgaccccgagacctacgccatgctgtcgcgcggcgaggtggtc
ggcgtgttccaggtggaaagtgccggcatgcgcaaggcgctgataggcatgcggcccgac
tgcatcgaggacatcatcgcgctcgtcgccctctaccggccaggcccgatggagaacatc
ccgacctacaatgccagaaagcatggcgaggaggagatggcctcgatccatcccaagatc
gaccatctggtgaaggagacgcaaggcgtcatcgtctaccaggaacaggtgatgcagatt
gcgcaggagctgtccggctattcgctcggcgaggccgaccttctgcgccgcgccatgggc
aagaagatccgcgccgagatggacaagcagcgcgagcgctttgtctcgggtgcggtcgag
cgcggtgtcagcaagccgcaagccgactttattttcgacctgctggccaagttcgccgac
tacggtttcaacaagtcgcacgcagccgcctacgccgtggtctcgtaccagaccgcctat
ctcaaggcgcattatccggtcgagttcctggccgcgtcgatgacgctcgatatgggcaat
actgacaagctcgccgacttccgccaggacgcgctgcgcctcggcatcgaggttctggcg
ccgtcggtgatgacgagttttcggcctttcgaggtcggcgagaaccgcatctattattcg
atggccgcactcaagggcgtcggcgacgcggcggtcgagcacatcgttgccgtgcggggc
gaaaaaccgttcaagaatctcgcggatttctgcgagcgggtcgatcccaagatcgtcggc
aagcgcgtcttcgaaagcctgatcatggccggcgcgctcgactgcttcggccatgaccgc
gcccagatgatggctggcgtcgaacggatgatgggattggcgtcacttgcccagcagaac
gccgtttccggccaggccgatattttcggcgcctcactcggcgctcagtcgcaggcgttg
aacctgccggcgacggacccatggctcgccgccgaccggctgcaccgcgaattccaggtc
gtcggtttctatctctcggcccatccgctcgacgaatacaaggcggccttgcagaagatg
cgggtgcagaactgggcggagttctcggccgccgtcaagcgcggcgcttctgccggccgc
ctggcaggcacggtgaccagcaaacaggagcgcaagacgcgcaccggcaacaagatgggc
gttgtggccttttccgatacttccggccagtacgaggccgtgctgttttccgaagcgttg
gcgcagtaccgtgacttgctggaagccggccgctccgtcgtgatcaccgtcgcggccgag
gaccggcccgagggcgtcaatttgcgcatcaactccgtgcaatcgctggaggaggaggca
agccgtatccagaaggcgctgcgcatattcgtcaggaacgatggacccgcctcgataatc
cagtcccagctcacccagcgcggtgaaagccaggtgagcatcatcgtaatcaaggaagag
gcccagggcgaggtcgagatcgctttgcagggcggctaccgcgtctcgccgcagatcgcc
tcggcgatgcgcgccgtgcccggcgtggtcgaagtggaactggtgtga
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