Mesorhizobium jarvisii: EB229_34400
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Entry
EB229_34400 CDS
T06715
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mjr
Mesorhizobium jarvisii
Pathway
mjr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mjr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EB229_34400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjr03400
]
EB229_34400
Enzymes [BR:
mjr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EB229_34400
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EB229_34400
DNA repair and recombination proteins [BR:
mjr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EB229_34400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QKC66692
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All DBs
Position
6931625..6932515
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLQPVLEGARLTRVEARRPDLRFPFPERFSERLTGRTITALGRRAKYL
TMHVQDGPVLICHLGMSGSFRIETGDDGETPGVFHHERSKSTAHDHVVFDVVGADGARSR
VIFNDPRRFGFMLFAEGSPETHPMLAGLGVEPTGNTLDGALLASLLQGRGSPLKAALLDQ
KLIAGLGNIYVSEALWRAGLSPLREAGTIAKPGKKARQQSERLAEAIRSVISDAIAAGGS
SLRDYMHTDGSLGYFQHSFAVYDREGEPCPKPGCGGHIERVVQSGRSTFYCRTCQS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcccgaagtcgaaacggtccggcgtggcctgcagccggtcctggaaggt
gcccgtctgaccagggtcgaggcgcgtcggccagacctgcggtttccctttcccgaacgg
ttttcggaaaggctgaccggcaggaccatcactgcactcggccgccgggccaaatatctg
accatgcatgtgcaggacggcccggtgctgatctgccatctcggcatgtcgggctccttt
cgcatcgagaccggcgacgacggcgagacacccggcgtgttccaccacgagcgctcgaaa
agcacggcacacgaccatgtcgtgttcgatgtggtcggtgccgacggcgcccggtcacgc
gtgatcttcaacgacccgcgccgcttcggtttcatgctgtttgcggaaggatcgccggag
acgcacccgatgctggccggactgggcgtcgagccaacgggcaatacgctggacggcgcg
ctgctcgcctcgttgctgcaaggccgcggatcgccgctgaaggcagcacttcttgaccag
aagctgatcgcgggactaggcaatatttatgtctcggaggcgctttggcgcgccggcctg
tcgcccttgcgcgaggcgggcaccatcgccaagccgggcaagaaggccagacaacaaagc
gaacgcctggccgaggcgatccgctctgtcatatcggacgccatcgccgccggcgggtct
tcgctgcgcgactacatgcacaccgatggatcgctgggctatttccagcattccttcgcc
gtctacgaccgtgagggcgagccctgcccgaagcccggctgcggcggccatatcgagcgc
gtcgtgcagagcggacgctcgaccttctattgccggacgtgtcagagctag
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