Maniola jurtina (meadow brown): 123865954
Help
Entry
123865954 CDS
T09254
Name
(RefSeq) transient receptor potential-gamma protein-like isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
123865954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mju04040
]
123865954
Ion channels [BR:
mju04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123865954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank_3
Ank
Ank_4
Ank_5
Holin_BhlA
Motif
Other DBs
NCBI-GeneID:
123865954
NCBI-ProteinID:
XP_045763146
LinkDB
All DBs
Position
6:172436..186846
Genome browser
AA seq
1142 aa
AA seq
DB search
MSGGSGGGERARRASTCRVEMGALLAPEPRPLDNKVKRHSIHGMTEEENVVRPHQEMEVL
SLEEKKYLLGVERGDVAGTRRVLQRARDTGHINVDCVDPLGRSALLMAIDNENLEMVELL
LEFGVETRDALLHAISEEFVEAVEALLDHEERTRKQGELHSWEALPPETATFTSDITPLI
LAAHRDSYEIIKLLLDRGAELPMPHDVRCACDDCVRARREDSLRHSRSRINAYRALASPS
LIALSSKDPILTAFELSWELRRLSALEHEFKTEYQELRVQCQEFATALLDHTRTSHELQV
LLNHEKGSPQAPLMEPGAPERMRLSRLKLAIKLRQKKFVAHPNVQQLLASIWYESVPGFR
RKNMLLQAAEMVRIGAMFPLYSLAYIAAPHSAAGRTLRKPFIKFLCHSASYFMFLFLLIL
ASQRIETAASGLFWGAPHTTPLSRRGAPPSLVEWLILAWVSGLIWSEVKQLWDMGLREYV
HDMWNVIDFVTNSLYVATVALRIVSHFQVRREMTLGLQWNQPREKWDAWDPMLLSEGLFS
AANIFSSLKLVYIFSVNPHLGPLQVSLSRMVLDILKFFVLDILVIFAFSCGLNQLLWYYA
DMEKKKCHISSSLTPANGTLLDPDACVVWRRFANLFETMQTLFWAAFGLVDLDSFELEGI
KIFTRFWGMLMFGTYAVINVIVLLNLLIAMMNHSYQLISERADVEWKFARSKLWISYFEE
GGTAPPPFNVVPSPKSMLYAWSWLQRRLCGQTRAKREHMRTIRRKAKQANERDFRYQAIM
RNLVRRYVTVQQRRAECGGVTEDDVNEIKQDVSAFRCELVEILRNSGMNTSTANAGAPVA
SGGGGGKKNRQKERRLMKGFNIAPGGSLPPVDEFFASLHHEHEAHGAHHASLSALLGQRL
RASQSSLSDGGPSARRKPPHKRRWGTIIEAARAARVSRLIGRSRSEDSVCDHARPSPSGS
ERSDSGSDSQRSPERVTRSGPLHPLSALAALKRKRKKFSDSRRAAEGARAASGASEALQR
ASSVPARAPPAPPPRAPRPPAPSVSPSTTTESVAGKGGSREPLLASLEDDALKEACGQCG
YEGAPDAGAASAEAEDARAASEAAAREAAEAEATCSRCAALARLAGVTPLAGHAPHHSAG
WL
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggcagcggcggcggcgagcgcgcgcggcgcgcgtccacctgccgcgtggag
atgggcgcgctgctggcgcccgagccgcgcccgctcgacaacaaagtcaagcgtcacagt
atacatggtatgacagaggaggaaaatgtggtgcggccgcaccaggagatggaggtgctg
tcgctggaggagaagaagtacctgctgggcgtggagcgcggcgacgtggcgggcacgcgg
cgcgtgctgcagcgcgcgcgcgacacgggccacatcaacgtggactgcgtggacccgctg
ggccgcagcgcgctgctcatggccatcgacaacgagaacctggagatggtggagctgctg
ctggagttcggcgtggagacgcgcgacgcgctgctgcacgccatctccgaggagttcgtg
gaggcggtggaggcgctgctcgaccacgaggagcgcacgaggaagcagggcgagctgcac
agctgggaggcgctgccgccggagacggcgacgttcacgtcggacatcacgccgctgatc
ctggcggcgcaccgcgacagctacgagatcatcaagctgctgctggaccgcggcgccgag
ctgcccatgccgcacgacgtgcgctgcgcctgcgacgactgcgtgcgcgcgcgccgcgag
gactcgctgcgccactcgcgctcgcgcatcaacgcctaccgcgcgctggcctcgccctcg
ctcatcgcgctctcctccaaggaccccatcctcacggccttcgagctgtcgtgggagctg
cggcgcctgtccgcgctcgagcacgagttcaagacggagtaccaggagctgcgcgtgcag
tgccaggagttcgccacggcgctgctggaccacacacgcacgtcgcacgagctgcaggtg
ctgctcaaccacgagaagggttcgccgcaggcgccgctcatggagcccggcgcgcccgag
cggatgcgcctctcgcggctcaagctggccatcaagctgcgccagaagaagttcgtggcg
caccccaacgtgcagcagctgctggcgtcgatctggtacgagagcgtgccgggcttccgg
cgcaagaacatgctgctgcaggcggccgagatggtgcgcatcggcgccatgttcccgctg
tactcgctcgcctacatcgccgcgccgcactccgccgccggccggacgctgcgcaagccc
ttcatcaagttcctctgccattccgccagctacttcatgtttctgtttctgctgattctg
gcgtcgcagcgcatcgagacggcggcgagcgggctgttctggggcgcgccgcacaccacg
ccgctgtcgcgtcgcggcgcgccgccgtcgctcgtggagtggctcatcttggcctgggtc
agcggtctgatctggagcgaggtgaagcagctgtgggacatggggctgcgcgagtacgtg
cacgacatgtggaacgtcatcgacttcgtcaccaactctctctacgtagccacggtcgcg
ctgaggatcgtgtcgcacttccaggttcgccgggagatgacgctggggctgcagtggaac
cagccgcgcgagaagtgggacgcgtgggaccccatgctgctgtcggaggggctgttctcg
gccgccaacatcttcagcagcctgaagctggtgtacatcttcagcgtcaacccgcacttg
ggaccgctgcaagtgtccctcagccggatggtgctagatattctaaagttcttcgttttg
gacatactagtaatatttgctttttcttgtggccttaaccagttgttgtggtattatgct
gacatggagaaaaagaaatgccacatcagctcgtcgttgacgcccgccaacggcacgctc
ctcgaccccgacgcgtgcgtggtgtggcgccggttcgcgaatttgttcgagacgatgcag
acgttgttctgggctgcgttcggtctggtggacctggactcgttcgagctggagggcatc
aagatcttcacgcgcttctggggcatgctgatgttcggcacctacgccgtcatcaacgtc
atcgtgctgctcaacctgctcatcgccatgatgaaccactcctatcagctcatatctgag
cgggcagacgtggagtggaagtttgcgcgcagcaagctgtggatcagctacttcgaggag
ggcggcacggcgccgccgcccttcaacgtggtgccttcgcccaagtcgatgctgtacgcg
tggagctggctgcagcgccgcctgtgcggccagacgcgcgccaagcgcgagcacatgcgc
actattcggagaaaagcaaaacaagcgaacgaacgagacttcaggtatcaggccatcatg
cgcaacctggtgcggcgctacgtgacggtgcagcagcggcgcgccgagtgcggcggcgtc
acggaggacgacgtcaacgagatcaagcaggacgtgtccgccttccgctgcgagctggtg
gagatcctgcgcaactccggcatgaacacctccacggccaacgccggtgcgccagtcgca
tcaggagggggaggcggcaaaaagaaccggcagaaggagcggcgcctgatgaagggcttc
aacatcgcgccgggcggctcgctgccgcccgtggacgagttcttcgcgtcgttgcaccac
gagcacgaggcgcacggcgcacaccacgcgtcgctgtcggcgctgctgggccagcgcctg
cgcgccagtcagtccagcctgtcggacggcgggccgagcgcgcgccgcaagccgccgcac
aagcgccgctggggcaccatcatcgaggcggcgcgcgcggcgcgcgtgtcgcgcctcatc
ggccgctcgcgctccgaggactccgtgtgcgaccacgcgagaccctcgccgagcggcagc
gagcggtcggactcgggcagcgactcgcagcgcagcccggagcgcgtgacgcgcagcggg
ccgctgcacccgctgtcggcgctggcggcgctcaagcgtaagcgcaagaagttctcggac
tcgcggcgcgcggcggagggcgcgcgggccgcgtcgggcgcgtcggaggcgctgcagcgc
gccagctccgtgcccgcgcgcgcgccgcccgcgccgccgccccgcgcgccgcgcccgcca
gcgccctccgtgtcgccctccactacgacggagagcgtggcgggcaagggcggcagccgc
gaaccgctgctcgccagcctcgaggatgacgccctcaaggaggcgtgcggacagtgcggg
tacgaaggcgccccggacgccggcgccgcgagcgccgaggcggaggacgcgcgcgcggcg
agcgaggcggccgcgcgcgaggcggccgaggcggaggccacgtgctcgcgctgcgcggcg
ctggcgcggctggcgggcgtcacgccgctggccggccacgcgccgcaccactccgccggc
tggctctag
DBGET
integrated database retrieval system
