Maniola jurtina (meadow brown): 123868240
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Entry
123868240 CDS
T09254
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123868240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mju03041
]
123868240
03009 Ribosome biogenesis [BR:
mju03009
]
123868240
Enzymes [BR:
mju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123868240
Spliceosome [BR:
mju03041
]
Complex A
U1 snRNP components
U1 related factors
123868240
Complex B
123868240
Ribosome biogenesis [BR:
mju03009
]
Eukaryotic type
Pre-60S particles
Helicases
123868240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
123868240
NCBI-ProteinID:
XP_045766632
EnsemblRapid:
ENSMJUG00000014781
LinkDB
All DBs
Position
9:8213812..8218096
Genome browser
AA seq
531 aa
AA seq
DB search
MSGNWNNSRGGSGGSKFGGGGSRFGGGGGGGGGYGNKKEFSGGQNMRRPNWDSLSLQPFN
KDFYNPPPSVLNRSPYEVEQFRNEHEITVSGAHIPNPIQHFEEGNFPDYVMQTIKSSGYN
DPTPIQAQGWPMAMSGKNLVGIAQTGSGKTLAYILPAIVHINNQPPVRRGDGPIALVLAP
TRELAQQIQQVATDFGNAAYVRNTCIFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG
TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG
DYLQINIGSMQLSANHNILQIIDICQEHEKENKLNVLLQEIGQNQEPGAKTLIFVETKRK
VENITRNIRRYGWPAVCMHGDKTQQERDDVLYQFKQGRASILVATDVAARGLDVDGIKYV
INFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNCRQAKDLVSVLQEANQVVCPQLQT
MADRSGGGGGGWNRNRYGGGRGGGSFKRGSSNFGRGNGHGGGGGHKRFNEY
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaattggaacaatagccgtggtgggagtggtggctccaagtttggtggtggg
ggatccagatttggaggaggaggaggtggtggtggtggttatggcaataaaaaagagttc
tcaggaggccaaaacatgagacgaccaaactgggattctctttctctacagccatttaac
aaagatttctacaatccacctccatctgtgctgaatagatctccatatgaagtagagcag
tttagaaatgaacatgagataacagtgagtggagctcacatccccaatcctattcagcac
tttgaagagggaaatttccctgactatgtcatgcaaacaataaagagctccggatacaat
gatccaacacctattcaggcacagggctggccaatggctatgtctgggaagaatttagtt
ggaattgctcagactggctctggaaaaactttggcctatatattacctgctattgtacac
ataaacaaccaaccacctgtgcggagaggtgatgggcctattgcccttgtcttagcacct
acgagagagttagcacaacagattcagcaagttgccactgactttggcaatgcagcctat
gtgcgaaacacttgcatatttggtggagcaccaaaaagagaacaagctcgggacttggaa
agaggggtggaaattgttattgccacaccaggaagattgatagattttttggaaaaggga
acaaccaatctacaacgttgcacctatttagtattagacgaagctgaccgtatgttggac
atgggttttgaaccccaaataaggaaaattatagaacaaattcgtcctgacagacaaact
ttgatgtggtctgcaacatggcccaaagaagttaaaaaattggctgaagactacctggga
gattatttgcaaattaatattggatccatgcagttgtctgctaaccacaatattctacaa
attattgatatatgccaagaacatgaaaaggaaaacaagctaaatgtactacttcaagaa
attggacaaaatcaagaaccgggagcaaagacacttatatttgtggagaccaagagaaaa
gtagaaaatataactagaaatataagacgctatggctggccagctgtatgcatgcatggt
gacaagactcagcaagagcgagatgatgttctgtaccaattcaagcaaggcagagcaagc
attcttgttgccactgatgttgcagcaagaggactggatgtggatgggatcaaatatgtt
attaactttgattatcctaactcatctgaagactacattcaccgaatcggaagaacaggt
cgctctaaatcaaaaggaacctcttatgcctttttcacaccttccaactgtcgtcaggcc
aaagatcttgtatcagtactacaagaagccaatcaggttgtgtgtcctcaacttcaaacc
atggctgaccgatctggtggtggtggcggtggatggaacaggaacaggtatggcggtgga
cgtggaggtggctccttcaaaagaggatcatcaaacttcggcagaggcaatggacatggt
ggtggaggtggccacaaaagatttaatgaatattga
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