Maniola jurtina (meadow brown): 123868510
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Entry
123868510 CDS
T09254
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123868510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mju03041
]
123868510
03009 Ribosome biogenesis [BR:
mju03009
]
123868510
Enzymes [BR:
mju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123868510
Spliceosome [BR:
mju03041
]
Complex A
U1 snRNP components
U1 related factors
123868510
Complex B
123868510
Ribosome biogenesis [BR:
mju03009
]
Eukaryotic type
Pre-60S particles
Helicases
123868510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
SAM_DrpA
Motif
Other DBs
NCBI-GeneID:
123868510
NCBI-ProteinID:
XP_045767011
LinkDB
All DBs
Position
9:complement(7782021..7791261)
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AA seq
832 aa
AA seq
DB search
MQFNSFHNQHPIFRPRLDRNEQFGKIPFFNGMHDFGGPKNFPPRNNMGNKNFRPRNDFNG
IRNDFNNTKNDTQDFGGPKEFRPRNNFNNQLQKTNEYEGDKASGGNMQFYNGKNDFGGPK
QQSYQKNFGPKSYNNQNGGHMNGQQSYVPKKIYNNSSVQPPSDYNNRNLQSRKAKHPGDS
LIKPQWDMANLGTIQKNFYKPHANVEGRSEDDVQTFLAAKEITVSGNDVPRPNQVFDEGN
FPDHILNTIKEQGWDEPTGIQAQGWPIALSGRDMVGIASTGSGKTLAYMLPAAVHIVHQP
RLQRGDGPIALILAPTRELAQQIQSVAQAYSAHGCIRNTCLFGGSPKGPQARDLERGVEI
VIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA
TWPKEIQALAEDFLNDYIKVNIGSLNLSANNNIKQIIEVCEEHEKELKLTNLLKEIASEK
DNKVIVFVETKKKVDDIARAVRRNGHKALAIHGDKSQPERDAVLTEFRNGATTILIATDV
AARGLDVEDVKFVVNYDYPNSSEDYIHRIGRTGRCQQSGTAYTYFTSGDARQARALVAVL
RETGQNPPAKLSDMARNNNNNSSRNRWQQRKENNSGASSPRQKSNQWNNKMATMSIEDNQ
NNTYQNRNPNQQAPRFSNQNQNNNQGYRQNNYQQKTMPFPSPTVFESMGNYQGGYNNGYQ
NAYNNQNGYGQRQQYNTDARNGGQQYHRNTNSVGNKSAGSGSSYGSPPPHFATPPHYPQM
HPHHQEMLGGKFYGGGVGGGGPCGYQAAVGAGVPYAHLPPGSLLYAAAPVQQ
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttaacagctttcataatcaacatcctatcttcagaccccggcttgatcgaaat
gaacaattcggtaagattccattttttaatgggatgcatgactttggtgggcccaagaac
tttccacctagaaacaatatgggtaacaaaaacttcagaccaagaaatgactttaatgga
ataagaaatgatttcaataacaccaaaaatgatacccaggattttggggggccaaaggaa
tttaggcctaggaataattttaataaccaacttcagaagaccaatgaatatgagggtgat
aaggcatctggtggaaatatgcaattttataatggaaagaatgattttggagggcctaag
caacaaagttatcaaaaaaattttggtcccaaaagttataacaaccaaaatggtgggcac
atgaatggccagcaaagttatgttcctaaaaaaatatataacaatagttccgtgcagccg
ccgtcagattataataaccgtaatttacaaagtcgaaaagccaaacacccaggagatagt
ctaattaagccacagtgggatatggcaaatctcggcaccattcagaagaacttttacaag
ccgcacgccaatgtcgaagggcgttcagaggatgacgtgcaaacattcctagccgccaag
gagattacggtaagcggtaacgacgttccccgtccgaatcaagtgttcgacgaaggtaac
ttccccgatcacatcctgaacactatcaaagaacaaggatgggacgagccaaccggcatt
caagctcaaggttggccaatcgcgctctccggccgggacatggtgggtatagcgtcgacg
ggatcgggcaaaacgttggcgtacatgcttcctgcagcggtgcatattgttcatcagccg
agactgcagcgcggagacggtcctattgcgctgatcctcgccccgacgagagagctcgcg
caacagattcaatcagtcgcgcaagcctacagtgcgcatggttgcattagaaacacatgc
ttgtttggaggttcaccgaaaggcccgcaggctagagacttggaaagaggcgtcgagatc
gtaattgcgacaccgggacgtttgattgattttctagaaaggggtactactaatctacgc
cgatgcacctacctagttctggatgaagctgacaggatgttggacatgggtttcgagcct
cagatccgtaaaataattgagcaaattcgccctgaccgtcaagtactgatgtggtcagcc
acttggcccaaggaaattcaggctctggctgaagatttcttaaatgattacatcaaagtg
aatattggctcattgaatctttccgccaataacaatattaaacagataatagaagtttgt
gaggagcatgagaaagagcttaaactaacaaatcttttaaaagagattgcttctgaaaaa
gacaacaaagttatcgttttcgtcgagacaaagaaaaaggtggacgacatcgctcgcgcc
gtgcgacgcaacggacacaaagcgctcgccatccacggcgacaagtcgcagccggagcgt
gacgccgtcctcacagagttccgcaatggagccactactattttaatcgctacagatgtc
gcagcccgcggtttagatgtcgaagacgttaaatttgtcgtcaactacgattatcctaat
tcgtccgaagattatatccatagaattggccgtactggtcgctgccaacaatctggtaca
gcttatacttatttcacgagcggcgatgctcgtcaagctcgcgccctagtggcggtcctg
cgggaaacgggacagaatcctccagccaagctgagtgacatggccagaaacaacaacaat
aactcaagccgcaatcgctggcagcaacgcaaggagaacaacagcggcgcgagctcaccg
cgccaaaagagtaaccagtggaacaacaagatggctaccatgtccattgaagataatcaa
aacaatacttatcaaaaccgtaacccaaatcaacaagctcctcggttctccaaccagaat
caaaacaataaccaaggttacaggcaaaataattatcaacagaagacaatgcccttcccc
agtccaactgtttttgaatcaatgggaaactaccaaggaggatacaataatggatatcaa
aatgcttacaacaatcaaaacggctatggacaacgccaacagtacaacacagatgctcgt
aatgggggacagcagtaccatcgcaataccaactctgttggaaacaaatcagctgggtca
ggatcttcatatggatccccgccacctcacttcgcaacacctccgcattatccacaaatg
catccgcaccaccaggaaatgcttggaggcaagttctacggcggcggcgtgggcggcggc
ggcccgtgcggctaccaggcggcggtgggcgcgggcgtgccctacgcgcacctgccgccc
ggctcgctgctgtacgcggcggcgccagtgcagcagtaa
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