Maniola jurtina (meadow brown): 123868511
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Entry
123868511 CDS
T09254
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123868511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123868511
03041 Spliceosome [BR:
mju03041
]
123868511
03036 Chromosome and associated proteins [BR:
mju03036
]
123868511
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123868511
Spliceosome [BR:
mju03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
123868511
Complex B
123868511
Complex C
U2 SnRNP specific factors
123868511
Chromosome and associated proteins [BR:
mju03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
123868511
TFTC complex
123868511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
GtgE
Motif
Other DBs
NCBI-GeneID:
123868511
NCBI-ProteinID:
XP_045767013
LinkDB
All DBs
Position
9:complement(9513511..9527524)
Genome browser
AA seq
1216 aa
AA seq
DB search
MYLYNLTLQGSTAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTLMKIEIFG
IIRSMMSFRLTGGTKDYLVVGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADADPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATAMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACHVADLTGEDT
PQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDDEFDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADKRVNEWKAPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQ
RAWFLAVGLVDNTVRIISLDPADCLAPRSMQALPASPESLCIVDQPFESGAKSALHLNIG
LNNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSAEAVLAVSSRTWLGYQYQNR
FHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQTYQPLDYTPRKF
IINSENNQIIILETDHNAYTEEMKKQRRIQMAQEMREAAAGGAPEEQQLANEMADAFLSD
VLPENVFSSPKAGAGMWASQIRVVDMTTGGSPTTVALLPLEQNEAAVSLCALRWSAHAEH
AALHLVVGVAKDCILSPRSCTEGSLHVYKIYNTGKLELVHKTPVDEYPGALAAFNGKLLV
GVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTVRQRIYVADVQESIFCVKYKKRENQL
IIFADDTNPRWITNTCILDYDTVAMSDKFGNIAIMRLPQTVTDDVDEDPTGNKALWDRGL
LNGASQKGDVVVNFHIGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF
QHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTP
AEVSKKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtataacctaacactgcaagggtctacggccatcacacacgccgttcacggt
aatttctccggcacgaagcagcaggagattataatatcacgtggcaaaacattagagctg
cttcgaccagatcccaacactggcaaagttcacacgctgatgaaaattgaaatattcggc
attatccgatcgatgatgtcatttcgtcttacaggcggcacaaaagattatttagtggtc
gggtctgattctggtcgcattgttatattggagtacattccagccaagaatatcctagaa
aaagttcatcaagaaacatttggcaagtctggctgtcgtagaatagtgccaggacagtac
ttagctatagatcctaaaggcagagctgttatgattggtgccattgagaagcagaaattg
gtgtacattttgaacagagatgccgaagcaagattaacaatttcctctccgctagaggca
cacaagtctaacactttggtttaccacatggttggagtggatgtcggctttgagaacccc
atgtttgcatgtttggagattgactatgaagaagctgatgctgatcctacaggtgaagct
gctcaaaagacacaacagaccttaactttttatgaattagatttgggtctcaaccatgtg
gtcagaaagtattctgaacctctcgaggaacacgccaacttcctaataacagtccctgga
ggtaacgatggaccttcgggggtacttatctgttctgagaactacctcacatacaaaaat
ttgggggaccagcatgatatccgttgccccatacctaggaggcggaatgacttggacgac
cctgaaagaggcatgatctttgtctgttctgcaacacacaagacaaagtcaatgttcttc
ttcttggcccaaacagaacagggagacatattcaagataacaattgagactgatgaagac
atggtcactgaaatcaagctcaaatattttgacactgtacccgttgccactgcaatgtgt
gttttgaaaactggcttcctgtttgtagcttgcgagtttggcaaccattacttgtatcaa
attgctcacttgggtgatgaagatgatgagccagagttcagctcagccatgccactggaa
gagggcgatacattcttctttgctccacgcccgctgagaaatttagtgctggttgatgaa
ttggattcactttcaccaatattagcttgccacgtggctgatttgactggtgaagacact
ccgcaagtatacctagcctgtgggagaggacctaggtcatcattaagggccttgagacat
ggtctggaagtagcagaaatggccgtttcagaactgcccgggtcgcctaacgctgtgtgg
actgttaggcgacacaaagatgacgagtttgactcttacatcatagtgtcgttcgttaac
gccacccttgtgctctctattggggagaccgtagaggaagtgacggactctgggtttctc
ggaacgacgcctacgttgagttgtcacgcgctcggcagcgatgccctagtacaagtatac
ccagatgggataaggcatattcgcgccgacaaaagggtaaatgaatggaaagctcctgga
aaaaagtccatagtcaaatgtgcagtgaaccaaagacaagttgttattgcactcactggc
ggtgaactggtatacttcgaaatggatcctactggtcagttgaacgagtacacggaaagg
aagaagctatcgtctgacgtgtcctgcatggcgctggggtccgtggcgacgggcgagcag
cgcgcgtggttcttagctgtgggtcttgtagacaacactgttcggataatttcactggat
ccagcagattgtttagcgccacgttcgatgcaggcacttcccgccagtcctgagtctttg
tgtatagttgatcaaccattcgaatctggcgccaaatccgccttacatctaaatataggt
ctaaacaatggagtacttttaagaaccactctagattctgttagtggagatttagcagac
acgaggaccaggtacttgggatctcgtccagttaagctatttaaagtgagagtacaatcg
gccgaagcagtattagctgtgtcatcgaggacatggttgggttaccagtatcagaatcgg
tttcatctaacgccactttcttacgaatgtctggaatatgcagccggtttcagttctgaa
cagtgtactgagggtattgtagcaatctcgtcgaacacgttaaggattttggctctggag
aagcttggtgctgtattcaatcaaacataccaaccgttggactacacaccacgaaagttc
atcataaactctgagaacaatcaaataattatactagaaactgatcacaacgcctacaca
gaggaaatgaagaagcaaagaaggattcaaatggctcaagaaatgcgggaagcagcggct
ggcggggcacctgaggaacaacaacttgctaacgaaatggcagatgcattcctatcggat
gttttaccagaaaacgtgttttcgtcacctaaggctggcgcgggcatgtgggcatcccaa
atccgcgtggtggacatgacgacgggtggcagccccaccactgtggctctgctgccgctg
gagcagaacgaagcggccgtgtcgctgtgcgcgctgcgctggtcggcgcacgccgagcac
gcggccttgcacctcgtggtcggcgtcgctaaggactgcatactgtcgccgcgttcgtgc
accgagggcagtctacatgtctacaagatttataatacgggtaaattagaattagtccac
aaaactccagtagacgaataccctggagcgttagctgcatttaacgggaaacttctagtc
ggcgtcggtcgcatgttgaggttgtacgacatcggccggagaaaactacttcgcaagtgc
gaaaatagacacattccaaacctcatagcagatattaaaacagtccgacaaagaatttac
gtggcagatgtacaggagtctatattttgtgttaagtacaagaagagggagaatcagctg
atcatatttgctgatgacactaatcctaggtggataacaaatacttgcatactagattac
gatacagtagcaatgtctgacaagtttggcaatatagctatcatgaggctgccacagacg
gtcaccgacgatgtggacgaagacccgacggggaacaaagctctttgggatagaggtctt
ctcaatggagcttcacagaaaggcgatgttgtcgtcaatttccatatcggtgaaactgtc
acgtcattgcaacgagcgacactcattcccggcggctctgaagctctcctctacgcaacc
attagtggatcgctcggagtactcctgccattcacttctagagaagatcatgatttcttt
caacatttggaaatgcacatgaggagtgaaaactcaccactgtgtggacgcgatcattta
tcctttagaagttattattatccagtaaaaaatgtgatagatggagatctctgtgaacag
ttcaactctttggagccggccaaacaaaaggcgattgcgggcgacttggaacggacgccg
gccgaggtgtccaagaaactagaagatattaggacaagatacgcgttctaa
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