KEGG   Maniola jurtina (meadow brown): 123869240
Entry
123869240         CDS       T09254                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mju  Maniola jurtina (meadow brown)
Brite
KEGG Orthology (KO) [BR:mju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mju03041]
    123869240
Spliceosome [BR:mju03041]
 Complex B
  Other components
   Complex B specific factors
    123869240
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 LisH_TPL NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Ge1_WD40 Beta-prop_NWD2_C Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_IP5PC_F LisH_WDR26 WDR54 Beta-prop_NOL10_N DUF7165 LisH_PAC1 zf_topless VPS8_N KNTC1_N
Other DBs
NCBI-GeneID: 123869240
NCBI-ProteinID: XP_045768035
LinkDB
Position
10:12929572..12939259
AA seq 517 aa
MSIEIESADVIRLIQQYLKESNLTKTLQTLQEETGVSLNTVDSVDGFCADINNGHWDTVL
KATASLKLPDKKLMDLYEQVVLELIELRELGAARTLLRQTQPCLLMKQQETDRYMHLENM
LARSYFDPREAYGGARGTAGGGKEWRRAALAAALAGEVSVVPSSRLLALLGQALKWQQHQ
GLLPPGTTIDLFRGKAAIRDEEDDQCPTQLSKMIKFGQKSHVECARFSPDGQYLVTGSVD
GLVEVWNFTTGKIRKDLRYQAHDEYMSMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVSS
GQVQRKLERAHAKGVTCLQFTRDNTQILSASFDRTIRIHGLKSGKILKEFRGHTSFVNEA
VFTPDGHSVLSASSDGTVKVWSVRTGECTATLKPLGSGEPPVNSLLLTPKNPDHFVVCNR
TNTVVIMNMQGQIVRSFSSGRREAEGGSLVCAALGARGRLVYCAGEDLVLYAFCAASGKL
ERTINIHEKAVIGMTHHPHQNLLATYSEDGLLKLWRP
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgtccatagaaatagaatcggcggatgttattcgcctcattcaacaatacctcaaagag
tctaacctcaccaaaacattacaaacattgcaggaagagactggcgtctctctcaacaca
gtagacagtgtggatggattctgtgcagacatcaacaatggccactgggacactgtcctc
aaagccaccgcatccctcaagttgccagacaagaagttgatggatctatatgaacaagtt
gtactggaactgattgagttgagggagctgggtgctgcaaggacactgctgcggcaaacg
cagccctgtctactgatgaagcagcaggagactgacagatatatgcaccttgaaaacatg
ctagctcgttcgtatttcgatcctcgggaggcctacggcggggctcgaggaacggcggga
gggggcaaagagtggaggcgtgcggcgcttgctgcggctttggcaggcgaagtttctgtc
gtgccatcttcgcgtctgctggctttgttgggacaggctctcaagtggcaacagcatcag
gggctgttacctcctggtacaaccatcgatttgttccgaggtaaagctgcaataagagat
gaagaagacgatcagtgtccaacacaactctccaaaatgatcaagtttggtcagaaatca
catgttgaatgcgcaaggttctctccagatgggcaatacctagtcacaggttcagtagat
ggcttagtggaagtgtggaactttacgacgggcaagatacgtaaggatctccgttatcaa
gctcatgacgagtacatgagtatggaggaagctgtgttgagcttagccttcgctcgtgac
agcgacacattggctgctggctccaacgatggcaagattaaagtatggaaagtgtcgtca
ggtcaggtgcagcgcaagctggagcgcgcgcacgcgaagggcgtcacgtgtctgcagttc
acgcgcgacaacacgcagatcctctccgcatccttcgaccgcaccatcagaatccacggg
ctaaaatctggcaagatcctaaaagagttccgcgggcatacatctttcgtcaacgaagct
gtgttcactccggatggtcacagtgtgctcagtgcttcttctgatggtacagtcaaggtt
tggtcagtacggacgggtgaatgcacggcgaccctcaagcccctggggtccggggaaccc
cccgtcaactccctgctgctaacgccgaagaaccctgaccacttcgtagtgtgcaaccgc
actaacaccgtagtcattatgaacatgcagggtcagatagtgcgttcgttctcgagcggt
cgtcgcgaggcggagggcgggtcgctagtgtgcgccgctctgggcgcgcgcggccggctt
gtgtactgtgcgggcgaggacctcgtgctctacgccttctgcgcggccagcgggaaactg
gagagaactattaacattcacgaaaaagcggtaataggtatgacacaccacccgcatcaa
aatctattggccacctacagtgaagacgggctgctcaagttgtggagaccgtag

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