Maniola jurtina (meadow brown): 123870359
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Entry
123870359 CDS
T09254
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123870359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mju03400
]
123870359
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123870359
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
123870359
NCBI-ProteinID:
XP_045769579
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Position
12:8268122..8296473
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AA seq
917 aa
AA seq
DB search
MSSLQPIHALNLDSVQQQAFVKYFHSLTDKPPTTVRIFDRNDYYSVHGIDATTAAREVFS
SISNIKKMGIEPNRLDYLVLSKGNFEILIRQLLLVRRYRVEIYVAEGSVKSCEWVLKYKG
SPGNMSQLEEVLGEGLGSPNEQAPCLMAVNMKSDSVTKGRLLGVACISQGDYLMSVSEFT
DDDLLTELETIAVQMAPSECIISSTENDDYKALKKVMDRANVTLTKLKKTDFSTEGLIQD
LNRLLKFKESQQQDANAFPETSKQVAMTSLAAAIKYISLLNDNTNFGRFRLATIQPDCFL
HLDAAALTALNVLPELGDSSHAPSRSLLGLLDRCRTQHGKRLLAQWLRQPLRDINLINER
LDIVELLMNSSQLRLQLHDDHLRRIPDLQALARRLTRRKANLHDCYRIYQAINRLPSLLQ
CLAEANNATVHSSLAEPISELNDDLEKFQQMIETTMDMDAVDRGDFLVKPSFDEQLQSLA
GELEKLQTSAEKELSKAARDLGLESGKTIKLESNPQNGFYFRVTMKEEQSLRGNKKYTII
DAVKGGVRFKTSALESITEDYLQTKASYEREQDKVVTEIIGIAAGYSECLFCLSHILSRL
DVLVSFAVAASTAPYPYCRPVITESLDEFILKDVRHPCLEVQEGVSYIPNDVTFKRDSCL
MHIVTGANMGGKSTWMRSCGVAALLAHAGCPVPASRAALPLLRALCARVGAADREDKGQS
TFMLEMIESAAILRTATPDSLVLVDELGRGTSTYEGCGIAWAIAEKLATESKCFCLFATH
YHELTRLPSLHPNVIVNSHAEASVVDQQLLLLHKILPGPATHSLGLHVAKLADLPDSIIK
YAEAKQAQLETNLFEVESSVETEETSEGQKLIVDFLRKCKQIQESIASDEEMMKEINKLK
QELLQQGSKYVQSLISI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcactgcagcctattcacgccttaaacttggattcagtacagcaacaagcattt
gttaaatactttcactctttgactgataaaccgccaaccaccgttaggatattcgatcgc
aatgactactacagcgttcatggcatcgacgcgactacggctgcgagggaagtcttctca
tctatttcaaatatcaagaaaatggggattgaacccaaccgacttgattaccttgtgctg
tctaaagggaacttcgaaattcttataaggcaactactattggtacgacgatatagagtg
gaaatatacgttgcagaggggtcagtcaaatcttgcgaatgggtattgaaatacaaagga
tcaccaggcaatatgtcgcagttggaagaagtactaggcgaaggactaggctctcccaat
gaacaggctccttgcttgatggcagtcaatatgaagagtgactcagtcacaaagggtaga
ctgttaggcgtggcgtgcatatcgcagggggactatctaatgtccgtatcggagttcacg
gatgatgacctcctcacggaattagaaacaatcgctgtgcaaatggcgccttccgaatgc
atcatttcatccactgaaaacgatgattacaaagccttgaaaaaagttatggacagggcg
aacgtaacactaaccaagctgaaaaagacggacttttctaccgaaggtctcatccaagat
ttgaaccggctactgaagttcaaagaaagtcaacagcaagacgccaacgcctttccagag
acgagcaaacaagtcgctatgaccagcttggctgcagctataaaatacatttcgttatta
aatgataataccaattttggaagattccgcttggccaccatacagccagattgtttcctg
cacttggacgcggctgctctcaccgcattaaatgtattgccggagctgggcgattcgagt
cacgcgccttcgaggagtttgctgggccttcttgacaggtgccggactcagcatggaaaa
cgacttctagcccaatggcttcggcagccactccgggacataaatctgataaacgaaaga
ctagacatagtagagttgctaatgaacagctcgcaactacgcttgcaactccacgatgac
catttgcgaagaattccggacttgcaagcgctggcccgacgccttactaggaggaaggcg
aatttacatgactgttatcgcatttatcaggcaatcaatagactgccgtccttactacaa
tgcctggcagaagccaacaatgcaactgtacactcatcattagcggagccaatatcagaa
ctcaacgatgacttggaaaaattccagcagatgatcgagaccactatggacatggatgcg
gtcgatagaggtgatttcttagtaaaaccatccttcgacgaacagttacaaagtctagct
ggcgaactagaaaaactgcaaacatccgctgagaaggaacttagtaaggcagccagagac
ttgggcttggaaagcggcaagactattaaattggagagcaatccacagaatggattctat
tttagagtgactatgaaggaggagcaatcactccgcggtaacaaaaagtacacaataatt
gatgctgtcaaaggtggagtaaggttcaagactagtgcgttggaaagtatcacggaagac
taccttcagaccaaagcttcatatgaaagggagcaggacaaagttgtaacggagattatt
ggtattgccgcgggttattcagaatgcctcttctgtctgtcccatattctgtcacggtta
gatgtgctggtctcattcgccgtggcagcctcaaccgcaccctacccctactgtaggcca
gtaataacggagagtctcgatgagttcatactgaaggacgtaagacatccgtgcttggaa
gtgcaggagggggtgtcttatatacccaatgacgttacttttaaacgtgattcgtgccta
atgcacatagtaacaggcgcgaatatgggcggcaagtcgacatggatgcgctcatgtggg
gtggccgcgttactcgcgcacgccgggtgcccggtgcccgcctcccgcgccgcgctgccg
ctgctgcgggcgctgtgcgcgcgcgtgggcgccgccgaccgcgaggacaagggccagagc
accttcatgctggagatgatcgagtccgccgctatactgcgaacggctactccagattct
ctggtgctggtggatgagcttggaagaggaacctcgacgtatgagggatgcggcattgcg
tgggctatcgctgagaaactagcaaccgaaagcaagtgcttctgcctgttcgcgacccac
taccacgagctgactcgcctgccgagcctgcaccccaacgtcatagtgaactcgcacgca
gaggcgtccgtggtggaccaacagctgctgttgctgcacaagatactgccggggcccgcc
acacactcgctggggctgcatgttgccaagttggctgatttgccggactctattattaag
tatgcagaagcaaagcaagcccagctggagacgaacctttttgaagtggaatcctccgtt
gagacagaagaaacgtcggaaggtcagaaactcatcgtagattttctacgcaaatgcaaa
caaatacaagaatccattgcttcggacgaagagatgatgaaagaaataaataaactcaag
caagaattactgcaacagggcagcaaatacgtacagtctttaatatcaatataa
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