Maniola jurtina (meadow brown): 123870632
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Entry
123870632 CDS
T09254
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju04382
Cornified envelope formation
mju04512
ECM-receptor interaction
mju04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123870632
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123870632
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123870632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mju04147
]
123870632
00536 Glycosaminoglycan binding proteins [BR:
mju00536
]
123870632
Exosome [BR:
mju04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123870632
Glycosaminoglycan binding proteins [BR:
mju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123870632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123870632
NCBI-ProteinID:
XP_045769968
LinkDB
All DBs
Position
1:complement(8960902..8976085)
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AA seq
1883 aa
AA seq
DB search
MAAPHYYWPRALAPAAGARSYSRAAVSRAAGRGRAGRRPRSPLSLVSRHKRRARTGHKRR
ALRAMADHVLWLVAALASISVVNPQQDGWNSPWSDWMSQNEYDPPVDENTYYRGLSRRPD
LPVSPPPSLPPEPQPPQRQPPSFGQNFAVYDPETRRRTTAFDRNCTAPGCCVPKCFAEKG
NRGFPGSPGPQGLQGLPGHEGPEGPQGPKGQKGHVGPQGPRGPKGERGKPGAQGFIGLTG
PPGPQGEPGFPGMPGRDGCNGTDGEPGLMGPKGPQGPRGIPGSKGDKGDKGEAAHIGRFS
KGQKGEPGADGMQGPQGPVGPTGPAGLPGPKGNTGPLGPFGPKGDKGAKGSAGQSIPGDK
GDRGDRGDRGPACPGITLPSTDSKGAIKGVQGDMGPKGEKGEPGRMGEKGDTGPMGEPGL
SGQMGIKGEKGLRGNPGERGRDGMYGPTGPMGQKGDRGYDGLAGLPGRPGLKGEPGKDGT
PGYPGLKGVPGPPGGRAGSRGPPGPQGPRGYPGPAGPPGTDGRPGDSGQPGPMGQRGGPG
EPGTPGTEGPTGPKGEKGEPGLNGLPGEIGVKGYDGPTGPQGPRGPKGEDGISIPGDRGN
NGMPGLPGDKGQKGERGYQGLRGVPGNSTLGTPGMPGEMGPAGEKGEKGSPGYDGVPGTP
GPKGDLGGRCNECWPGAPGAKGDRGDDGLTGPRGERGPQGPVGLRGERGSDGINGLPGTA
GAPGERGDEGPMGPEGERGADAIIPSNLVKGPPGERGAPGEKGVMGPKGERGIDGPTGDR
GLNGMPGQKGDMGRMGPPGLDGIPGSDGTPGTPGAKGTSLKGEKGEIGEEGEKGDKGYEG
RSGLKGEPGQCPLELKERTKGDKGNPGAPGPQGPIGMPGQKGEPGQMGLTGEKGQKGITG
RAGPVGPRGPPGPKGDKGDLGAMGFPGTAGETGPRGFPGIPGFKGDKGEIGPSMPGPPGP
AGLKGDKGNAGPRGTPGIPGNDGPPGPIGLHGEKGDMGFVGQRGFSGPPGQKGEPGPIGP
HGFSGSPGLPGRDGPKGQQGYQGIPGKPGVIGLPGPKGEPGVQGPDGPRGFPGPRGNPGL
AGQPGVDGSQGERGEKGERGYPGQPGERGFDGPLGPAGLPGLKGDQGYQGPPGNPGRTGP
IGDKGNMGLPGPRGPKGEPGFAGEKGQRGERGFDGLRGLDGMPGRDGEKGDKGEYGQPGY
GLPGAPGPKGDAGLPGFDGAKGDMGPKGDKGMQGPTGPKGERGINGEAGPPGTPGLDGIP
GAAGERGLPGFDGEKGDRGDRGIPGRDGLDGLKGDRGTQGAPGLTGPVGFTGDKGDRGLP
GLSINIKGERGDIGPPGIPGLQGEKGDRGDEGLQGLQGEKGERGYAGVKGEMGRYGQIGM
KGDRGPSGPAGRPGLTIKGEKGLPGLPGKHGRPGLPGAPGEKGDQGLTGLPGQTGRPGIP
GSPGMQGEKGDQGREGIAGPPGFDGNPGAPGQQGVMGLRGEKGDKGATGFGLPGAKGEPG
PPGINGQQGQKGDKGERGFDGLVGQPGEKGDQGEKGDRGYQGRIGSPGLFGQKGDKGEAA
AIVYGDKGERGPQGPPGLAGIPGRDGAPGAKGLDGSPGMKGDAGLPGPIGPPGPPGPRGL
QGLQGERGDIGLTGRQGMPGTPGAPCTNTDYLTGILLVRHSQTEIIPQCEPGHVKLWDGY
SLLYIDGDEKAHNQDLGFAGSCVRQFSTMPFLFCDLNNVCHYASRNDRSYWLSTNQPVLM
MPVEGQEIAPYISRCVVCEVPANVIAVHSQTLDIPSCPQGWNSLWIGYSFVMHIGAGGQG
GGQALASPGSCLEDFRATPFIECNGEGGTCHHFTNGLSFWLTTIDDNKQFAMPERETLKS
GRLLQRVSRCAVCIKNTDSSRPY
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgccgcactactactggccgcgcgccctcgcgccggcggccggggcccgcagc
tactcccgcgccgccgtctctcgcgccgcggggcgggggcgcgcaggccgccgcccgagg
tctcctctttccttagtatcccgacataaacggcgcgcgcgcacgggacacaagcgccgc
gcgctccgggccatggcagaccacgtactttggttggtggctgctttggcgtcgattagt
gtagtgaatccgcaacaagatggatggaacagcccgtggtccgactggatgtcgcagaac
gaatacgatccgcccgtagatgagaacacatactatcgcggcttgtcgaggaggccggac
ttgcccgtatcgccgccgccgtcgctccccccagaaccacaaccgccacaacgtcaacct
ccgagttttggccaaaactttgctgtctacgatcccgaaacaagaaggcggacaacggca
tttgatcgcaactgcacggcacccggttgctgtgtgccaaaatgcttcgccgagaagggt
aaccgaggatttcctggctcacctggacctcaaggactgcaaggtcttcccggacatgaa
ggaccagaaggaccgcaaggtccgaaaggacagaaaggtcacgtgggcccacaaggtcca
agaggaccaaaaggagaacggggaaaaccaggagcacaaggttttatcggattgacgggt
cccccaggcccgcaaggtgaacccgggtttcctggaatgcctggtagagatggatgtaat
ggcacggatggagaacctggattaatgggacctaaagggccacaaggtcctcgtggtatt
cctggttcaaaaggagacaaaggtgataaaggagaagcagctcatattggacggttttca
aagggacaaaaaggagaaccaggggctgatggtatgcaaggccctcagggtcctgttggt
ccaacgggtcctgcagggttacctggtcctaaaggaaatactggaccgttgggccccttc
gggcctaaaggcgacaagggtgccaaaggatcggcagggcaatcaattccaggagataaa
ggagatagaggagacaggggtgatcgagggccagcttgtccaggaattacattaccttct
acagacagcaagggtgctatcaaaggagtccaaggggatatgggaccaaaaggagaaaaa
ggtgaaccgggtagaatgggtgaaaagggagacaccggacctatgggagaacctggatta
tctggacaaatgggtattaaaggagaaaaaggccttaggggaaacccaggagaaagaggt
cgcgatggaatgtatggtcctacaggacctatgggacagaaaggagatagaggttacgac
ggtctagctggtcttcctggcagacctggattgaaaggagaacctggcaaagatggaaca
cctggttacccaggtttaaaaggtgtgcctggtcctcctggtggccgagcaggatcgcgt
ggacctcctggaccacaaggaccgagaggttacccgggacccgctggtccaccaggaaca
gatggtagacccggagacagtggacaaccaggacccatgggacaacgcggtggtccaggt
gaacctggaacacctggtactgaaggtccgacaggtccgaaaggagagaagggagaacct
ggtcttaacggtttacctggagaaattggagtaaaaggttacgatggacctaccggaccg
caagggcctaggggaccaaaaggagaagatggtatttcgatacctggagacagagggaat
aatggcatgccaggcctcccaggcgacaaaggtcagaagggtgaaagaggatatcaaggt
ttacgaggtgttcctggaaattccactttaggtacacctggaatgccaggtgaaatggga
ccagcaggagaaaagggtgaaaagggaagtccaggctatgatggtgtgcctggtaccccc
ggcccgaaaggagatcttggtggacgttgtaatgaatgttggcctggtgcccctggtgca
aagggggatcgtggcgacgatggactgactggaccacgcggagaacgtgggccgcaaggc
ccagttggactacgtggcgaaaggggatctgatggtatcaatggtctgccaggaacggct
ggtgcaccgggtgaacgaggcgatgagggaccaatgggaccagaaggagaaaggggagct
gatgcaattattccatctaatttagtaaaaggacctccaggagaaagaggtgcaccgggt
gaaaagggtgtcatgggtcctaaaggtgaaagaggtatcgatggcccaactggagatcgt
gggctcaatggtatgcccggacagaaaggcgacatgggtagaatgggaccacctggttta
gatggtatccctggatctgatggtacacctggcaccccgggggcaaagggaacttcgcta
aaaggcgaaaaaggcgaaataggtgaagaaggcgagaaaggtgataaagggtatgaagga
agatccgggcttaaaggtgaaccaggacagtgccctctcgaattaaaagaacgaaccaaa
ggagataaaggaaatcctggagcacctggccctcaggggcctataggtatgcccggtcaa
aaaggtgaaccaggtcaaatgggtttaactggagaaaaggggcaaaaaggtattactgga
cgagcaggaccagttggcccacgaggcccaccaggccctaaaggtgacaaaggagaccta
ggagcaatgggattcccaggaactgcaggcgaaacagggccaagaggttttccaggaata
cctggcttcaaaggtgataaaggtgaaataggaccatctatgccaggacccccagggcca
gctggattaaaaggcgataaaggaaatgcaggacctagaggtacacctggaattcctggc
aatgatgggcctccaggacctattggtttacatggagaaaaaggagatatgggctttgtt
ggacaacggggcttctccggacctccaggtcaaaaaggagagcctggcccaattggtcct
cacggattttcgggttcacctggtttacctggaagagacggaccgaaaggacaacagggt
tatcaaggaatacccggtaagccgggagttattgggttacctggacctaagggtgaaccg
ggggtgcaaggaccagatggtccaaggggtttcccaggcccacgtggaaatccaggttta
gcaggacagcctggggttgatggaagccaaggtgaaaggggtgaaaaaggcgaaagaggt
tatcctggacagcctggggaacgtggttttgatggtcctttaggaccagcaggcctccct
ggattaaaaggggaccaaggctatcaaggcccacctggaaaccctggcagaaccggccct
ataggagataaaggaaatatgggtttgccaggtccaaggggaccaaaaggagaacctgga
tttgcaggagaaaagggtcaaagaggagaacgtgggttcgatggcttaagaggattagat
ggtatgcctggcagggatggcgaaaagggagacaaaggtgaatacggccaaccaggatac
gggttgcccggagctcccggtccgaagggtgacgcaggtctacccgggttcgatggtgct
aaaggtgacatggggcccaaaggtgataaaggaatgcagggaccaactggaccaaaagga
gaaagggggattaacggagaagctggcccaccgggcactcctggtttagatggtattccg
ggcgcagctggcgagaggggtctgcctggatttgacggtgaaaaaggagaccgaggcgat
agaggtatccctggacgtgatggcttagatggattaaaaggtgatcgtggaacacagggc
gctccaggtttaacagggcctgtaggattcactggagataaaggagatcggggattacct
ggtctatctataaatattaaaggagaaagaggtgacatcggacctcctggtataccagga
cttcaaggtgaaaaaggtgataggggtgacgaaggacttcaaggattacaaggagaaaaa
ggggaacgtggctatgctggggttaaaggagaaatgggtcgatatggccagatcggaatg
aaaggtgatagaggaccatctggccctgcaggacggcctggtcttacaattaaaggcgaa
aagggtttacctggattaccaggtaagcatggtagacccggattaccgggtgcgcctggg
gaaaagggagaccaaggcttgacaggccttccaggacaaacaggacggccaggaatacca
ggatctcctggcatgcaaggagaaaaaggagatcaaggacgtgaaggaattgcaggacca
cccggttttgatggaaatccaggagctccaggacagcagggagtaatgggcctgagaggt
gaaaagggtgacaaaggagcaacaggttttggtttacctggagctaaaggggaaccaggt
cctccaggtattaatgggcagcaagggcaaaagggtgataaaggagaacgtggttttgat
ggtcttgtaggacaacccggagaaaaaggtgatcaaggtgagaaaggagatcgaggctac
caaggacgtataggatcaccaggtttatttggccagaaaggtgacaaaggtgaagcagct
gctatcgtgtatggcgataaaggagaacgaggacctcagggtccacctggcttagctgga
attccagggcgtgacggtgccccaggtgctaagggcttagacggtagtccgggaatgaag
ggtgatgcaggactaccaggacccataggtcctcccggtcctccaggacctcgaggatta
caaggcttacaaggtgaaagaggtgatataggacttactggacgacaaggcatgcctggt
actccaggagcaccctgtacgaatacagattacctgacaggaattttactagttcgacac
agtcaaactgagattatacctcaatgtgaacccggccatgttaagctatgggatggatat
tctcttctgtacatcgatggtgatgaaaaagcacataatcaagacttgggctttgcaggt
tcatgtgttagacaatttagcaccatgcccttcttgttctgtgatcttaacaatgtgtgc
cattatgccagtcgcaatgaccggagctattggttatcaacgaatcagcctgttctcatg
atgccagtagaaggtcaagaaatcgctccatatatttcgagatgtgtagtctgtgaagtt
ccagccaacgttatagcggttcacagtcaaactctagatattccaagttgtccacaagga
tggaattcattatggattggatacagttttgttatgcatattggagctggaggacaaggc
ggcggacaggcattggctagccctggctcgtgtcttgaagacttccgagcaacaccgttc
atcgaatgtaacggcgaaggtgggacctgtcatcacttcacaaacggacttagtttctgg
cttacaacgatagatgacaacaaacagtttgcgatgccagaacgcgaaactctgaagtct
ggtagactcttgcaacgagtatctaggtgtgcggtgtgcataaaaaatacagacagttct
cggccgtactaa
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