Maniola jurtina (meadow brown): 123871047
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Entry
123871047 CDS
T09254
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123871047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mju03019
]
123871047
Messenger RNA biogenesis [BR:
mju03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123871047
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
NRDE-2
RB_A
Motif
Other DBs
NCBI-GeneID:
123871047
NCBI-ProteinID:
XP_045770564
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Position
13:11279061..11295248
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AA seq
725 aa
AA seq
DB search
MTADENAEIDWGNERLTRAQRAVEANLYDVDSWSLLIREAQTRPISEVRTMYEKLIAAFP
TTGRYWKIYIEQEMKARNFERVEKLFQRCLMKILNIELWRLYLNYVKETKCMLPTYKEKM
AQAYDFALDKIGLDIHAYPIWNDYVTFLKAVDAVGSYAENQKISAVRKVYQRAVITPIIG
IETLWKDYIAFEQGINTIIAERMAMERSREYMNARRVAKELETVTRGLNRNMPATPPTAD
REEMKQVELWKKYITWERSNPLRSEDTALVARRVMFAIEQCLLCLAHHPDVWHQAAQFLD
HSAKLLQEKGDSNAARLFSDEAAAVYERATSGPLKHSTLLHFAHADYEESRLHYNKVHQV
YTRYLDMEDIEPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRSQYHVFVAAALMEYYC
SKDKNIAFRIFELGLKKFSHCPEYVLCYIDYLSHLNEDNNTRVLFERVLSSGSLKPESSV
DIWNRFLEFESNIGDLVSIVKVEKRRQAVLEKIKEFEGKETAQLVDRYKFLDLYPCSIAE
LKSIGYTEVASMSNKSWALGGPLAGISPELAAVILGQKDNDPNKDIARPDTNQMIPYKPK
ANPLPGEHPISGGTFPMPPAAAHLCTLMPPPSSFRGPFVAVDRLIQLFNRISLPDKPPAP
SQENGCDTKLFDLARSVHWIVDDDGISTNNKARRRKAGEDSDDDELGVAPPLNDIYRQRQ
QKRVK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggacgaaaatgccgaaattgattggggaaacgaaaggttgactcgcgcccag
cgggcggtggaggcaaatctctatgacgtcgattcctggtccctcttgatccgggaagct
caaacgaggcctataagtgaggttcggactatgtacgagaagcttattgcagcgttcccg
accacggggaggtactggaagatctatattgagcaggagatgaaagcgagaaactttgaa
agagtagaaaagttgtttcagagatgcttgatgaagatcctgaatatcgaactgtggcgc
ctctacctcaactacgttaaggaaactaaatgcatgttacctacctacaaagagaaaatg
gcgcaggcgtacgattttgcgttagacaagattggcttggacatccatgcttacccaatc
tggaatgactatgtgacatttctgaaagcagtcgatgcagtgggctcttatgctgagaat
cagaagatttctgctgttagaaaggtatatcaacgagctgttataacacctataattggt
atcgaaactctatggaaagactacatagcatttgaacaaggcatcaatactattattgcg
gaacgtatggcaatggaacgatctcgcgaatacatgaacgcgcgaagagttgccaaggaa
ttagagacagtgactcgaggcctgaacagaaacatgcctgccacgccgcccaccgccgac
cgggaggagatgaaacaggtggaactgtggaagaaatatataacctgggagcgttcgaac
cctctacgctcggaagacaccgcgctcgtggcccgacgcgtcatgttcgctatagagcag
tgtctgttgtgtctagctcaccatccggacgtatggcatcaagctgcacagtttctagat
cattctgcaaagcttttacaggagaaaggggactccaacgctgcccgtctgttctctgac
gaggcggccgctgtatacgagagggccacgagcggcccgctcaaacattccactctgctg
cacttcgcccacgcggattacgaagagagcaggctgcactataataaggtccatcaagta
tatacgcgttatttggacatggaagacatcgaacccacactagcatacgtgcagtacatg
aaattcgcgcgccgagctgagggcatcaaatccgctagaaccgtgtttaaacgcgctagg
gaggaccccaggtcccagtaccacgtgtttgtcgcggcggccctgatggagtactattgc
tcgaaggacaagaacatcgcgttccgtatcttcgagctcggcctcaagaagttctcgcac
tgccccgaatacgtgctttgctatatcgactacttgtcacatcttaacgaggacaacaat
acgcgcgtactattcgagcgtgttctatcatcaggcagtcttaaaccagagagctcggtg
gatatttggaacaggtttctggagtttgagtccaacattggtgacttggtcagtattgtg
aaggtggagaaacgaagacaggcggttcttgaaaagatcaaagagttcgaaggcaaagag
actgctcagttggtggatagatacaagttcttggatctctacccttgtagtatcgccgag
ttgaaatctattgggtatactgaggtagcatcgatgtccaacaaatcgtgggctcttggc
ggacctctggcgggcatatcgccagaactagcggcggtcatattgggtcaaaaggataat
gatccgaacaaggacatagcgagacctgacactaatcagatgattccctacaagccaaag
gctaacccactgccaggagagcaccctatatcgggcggtacgttcccgatgccaccggcc
gcggcgcacttgtgcacgctaatgccgccgccctcgagcttccgagggcccttcgtggcg
gtcgacagactcattcagctgttcaacaggatctcgctgcctgacaaaccgcctgctcca
agccaagaaaacggctgtgacaccaaactgttcgacctagctcgctccgtgcattggata
gtggatgatgacggtatcagcactaataacaaggctcgtcgaagaaaagcaggtgaggat
tccgatgacgacgagctgggcgtggcgccgccgctcaatgacatttacaggcagcgacag
cagaagagagtgaaataa
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