Maniola jurtina (meadow brown): 123871331
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Entry
123871331 CDS
T09254
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03013
Nucleocytoplasmic transport
mju03015
mRNA surveillance pathway
mju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123871331
09122 Translation
03013 Nucleocytoplasmic transport
123871331
03015 mRNA surveillance pathway
123871331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mju03019
]
123871331
03041 Spliceosome [BR:
mju03041
]
123871331
Enzymes [BR:
mju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123871331
Messenger RNA biogenesis [BR:
mju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123871331
Spliceosome [BR:
mju03041
]
Complex C
Other components
EJC/TREX
123871331
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123871331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123871331
NCBI-ProteinID:
XP_045771034
LinkDB
All DBs
Position
13:complement(283538..285377)
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AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQTTDGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMPGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNN
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMSQDERLTRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgataacgacgatcttctcgactacgaagatgaagagcaagcagatcaacagacc
accgacggagcgaccgaagcggcgccaaaaaaagaggttaaaggatcatatgtatcaatc
catagttccggcttcagggatttccttctaaaacctgaaattttacgtgctatagtcgac
tgcggttttgagcatccgtcagaagtgcaacacgaatgcattccgcaggccgtactcggt
atggacatcttgtgtcaagcgaagtccggtatgggaaagactgctgtgtttgtattggcg
actctgcagcaattggagccgtccgagaaccacgtatacgtcttagtgatgtgccacact
agagagctggcgttccagatcagcaaagagtacgagcgcttttccaagtacatgcccggc
gtgcgggtgtccgtgtttttcggcggaatgccgatccagaaggacgaggaagtgctgaag
actgcgtgcccgcacatcgtcgtcggtactccggggcgtatcttagctttagtcaataat
aagaaattgaatttgaagcacttgaaacatttcattctggacgagtgcgacaagatgctc
gaatcgttggacatgcggcgagacgttcaagaaatcttccgcaacactcctcacggaaag
caagttatgatgttctctgctaccctgagcaaggagatccggcccgtctgtaagaagttc
atgcaggatcctatggaggtgtatgtggatgatgaagccaaactaacactgcacggttta
cagcaacattatgttaaactcaaggaaaacgagaagaataagaaactttttgagctgctt
gatgtcttagaatttaaccaggtagtgatatttgtgaagtctgtgcaacgatgcatagct
ctggcccaactgctcacagatcagaacttccccgccattggtattcataggaacatgtcc
caagacgagaggctgacgcgctaccagcagttcaaggatttccagaagaggatattagtg
gctaccaacttgtttggaagaggaatggatattgaacgagtcaatattgtgttcaactat
gacatgcctgaagattcagatacctatttacacagagtagcgcgagcgggcagatttggt
accaaaggcttggcaataaccatggtatccgatgagaatgatgcaaaaatcctgaatgag
gtccaagaccgctttgatgtcaatataaccgagctacctgaagaaattgaattatcaact
tatatagagggccgataa
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